Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1122272 116 5e-21 >seq1122272 Length=1600 Score = 116 bits (128), Expect = 5e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 42449 AAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 42508 ||||| |||||||| || || || ||||| ||||| || ||||| ||||| |||||| Sbjct 877 AAATTCTCGTTCACAATGCCATCGCTGGCAGCAAAGAATGCCAACACATGAGAAATAAAA 936 Query 42509 TATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCT 42568 | | || || ||| | || || | ||| | | | ||||| || | ||| || || Sbjct 937 TGCCTCTCCTCTGGTTTCAAGTTTTCCCAGTGTGTCAAGTCTTTGGAGAGATCCACCTCC 996 Query 42569 TCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGA 42628 || | ||||| || ||||| || ||||| || ||||| |||||||||||||| |||| | Sbjct 997 TCAGCTGTCCAGAAGGATGCCTCAGCCTTCTTGTACATCTTCCAGATATCATGGTATTCA 1056 Query 42629 ATTGGGAAAATAACAAA 42645 || || || | |||||| Sbjct 1057 ATGGGAAACACAACAAA 1073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661691607038560