Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_004112.1 Length=43411 Score E Sequences producing significant alignments: (Bits) Value seq481546 262 1e-65 seq733401 134 4e-27 >seq481546 Length=7382 Score = 262 bits (290), Expect = 1e-65 Identities = 503/734 (69%), Gaps = 12/734 (2%) Strand=Plus/Plus Query 28305 TTACCGACGAGAGCCATCACTCTCTGGCAAAGACTTACCGAAAAATATACAGCTTTTATG 28364 |||| ||||| | ||| ||| | ||| || ||||| || |||||||| | || Sbjct 5071 TTACTGACGAAACCCACCACAGTAAGGCTAAAACTTATCGCAAAATATATGATTATTTCT 5130 Query 28365 CAGATGTTCCGCGTCTCGGCTTTTCTGCCAGTCCGTGGCGAATGAATGGTCAAGGATTAG 28424 || |||||||| | || || ||| |||||| || ||||| |||||||| |||||||||| Sbjct 5131 CAAATGTTCCGAGACTTGGTTTTACTGCCACACCATGGCGTATGAATGGACAAGGATTAG 5190 Query 28425 GGAATGTTTACGAATCGATGGTAGAAGGTCCATCAGTTAAATGGTTGATTGATCACCAGT 28484 | ||||||| |||||| | || ||| | |||| ||||| || | ||||| | Sbjct 5191 ACGACATTTACGACTCGATGATTGAGGGTAAAAACGTTAGCTGGTTAATAGCCCACCATT 5250 Query 28485 ACCTAGCGCCTTACGACTATTATGCCCCCACACTGATTGATGTTCAGAAACTGCAAACAT 28544 | ||| | || || | ||||| | | ||| |||||| | ||| | ||| || Sbjct 5251 ATCTATCACCATATCAGTATTACTCGGTAAAACTTGTTGATGATAGTAAATTAAAAAAAT 5310 Query 28545 CTAGTACCGGCGATTATACGAACAAGTCGATGGATGCGGCCGTGCCTAAGGCCATCTTCG 28604 | |||||||| ||||| || | ||||| ||||| | || | || | || || | Sbjct 5311 CGAGTACCGGTGATTACACCAGTAAGTCAATGGACGAAGCAATTGGGAAAACGATTTTTG 5370 Query 28605 GTGATGTGGTTAGCCACTATC-AGCATTTGGCTGGTGGCCGCCAAGCGATCGTTTACGCC 28663 ||||||| |||| ||||| | || |||| || | ||||| || |||||||| Sbjct 5371 GTGATGTTGTTAAAACCTATCGAACAAA-GGCTAATGATCAGCAAGCAATTGTTTACGCG 5429 Query 28664 CATAGTATCGAGGCGAGTAAACAGGTCGTTGAGGCATTTCAATCGGCAGGTATCACAGCT 28723 ||| | | ||| || || | ||| || || || || ||||| |||| Sbjct 5430 CATGATGTGGAGTACAGCCAAGCTACAGCTGAAGCTTTCAAAAATGCCGGTATTTCAGCA 5489 Query 28724 GTGCATGCGGATGCGAAAACACCAAAAGGACAACGTGA---TCGCATTATGGCTGACTTT 28780 || |||| || || ||||| || ||| |||| || ||| || ||| ||||||| Sbjct 5490 GTACATGTTGACGCTAAAACGCCTAAA--ACAATCCGAAACTCG-ATAATGAGTGACTTT 5546 Query 28781 AAAGCCGGAAAAATAACCATTTTATCCAACGTGGATCTGATCAGCGAAGGTTTTAACGTA 28840 ||| | |||||||| | || ||| |||||||||||| || |||||| |||||||| Sbjct 5547 AAATCGGGAAAAATTAAAGTTCTATGCAACGTGGATCTTATTTCCGAAGGATTTAACGTT 5606 Query 28841 CCCGATGTCGGCGTGATCATCATGCTGAGGCCAACTGCTTCGTTGGTACTGGATATTCAG 28900 || ||| | || |||||||||| || ||||||| ||| |||| | || ||||| Sbjct 5607 CCAGATTGCTCGGTAGTCATCATGCTAAGACCAACTGAATCGCTGGTCTTAGACATTCAA 5666 Query 28901 CAGTCAATGCGCGGCATGCGATACAAGCCGGGAAAACGGTCGATCATTATCGACCATGTA 28960 ||||| ||||| | ||| |||||||||| || ||| | ||| ||||||||||||||| Sbjct 5667 CAGTCGATGCGGTGTATGAGATACAAGCCTGGTAAAATGGCGACCATTATCGACCATGTT 5726 Query 28961 GCCAATGCATATCGGTTCGGCTTACCTGATACTGAGCACG--AATGGACACTGAATGATC 29018 || || | || || || || || || || | | || | |||| || | || || Sbjct 5727 GCTAACTATTCGCGTTTTGGGTTGCCAGACAC--ACCTCGGCAGTGGAGTCTAACTGGTC 5784 Query 29019 GGCCTAAAAAGAAA 29032 |||||||||||||| Sbjct 5785 GGCCTAAAAAGAAA 5798 >seq733401 Length=1911 Score = 134 bits (148), Expect = 4e-27 Identities = 123/153 (80%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 31702 TTGTATGGTTCGGAATTCGAGTACAAGCCAGAGTTCAAGCTATGGTTGGCAACAAACCAC 31761 |||||||| ||||||||| | || ||| |||| ||||| ||||| ||||| |||||| Sbjct 1024 TTGTATGGCAAGGAATTCGAATTTAAACCACAGTTTAAGCTGTGGTTAGCAACTAACCAC 965 Query 31762 AAGCCAATTATTCGCGGCACAGACGATGGTATCTGGAGGAGGCTGATGCTGATCCCGTTC 31821 ||||||||||| || |||||||| |||||||| ||| || | | |||||||| || ||| Sbjct 964 AAGCCAATTATACGAGGCACAGATGATGGTATATGGCGGCGATTAATGCTGATTCCATTC 905 Query 31822 AATGTTCAGATTCC-AGAGAACAAAGTCGATAA 31853 |||||||| || || | || | ||||| ||||| Sbjct 904 AATGTTCAAATACCGACAG-ATAAAGTTGATAA 873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136937498960856