Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq688428 134 1e-26 seq1085090 82.4 8e-11 >seq688428 Length=1164 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||| | ||| | |||| || |||||||| || ||||||||||| Sbjct 821 GCCACCACGCAGACGAAGAACCAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGA 762 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| |||||| ||||| || |||||| | |||| ||||||||| || || || Sbjct 761 CAAAGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAAACGTTGCTGGTCTGGTGG 702 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||| ||||| ||||| ||||| | ||| | ||||| | || ||||| Sbjct 701 AATGCCTTCCTTGTCCTGGATTTTAGCTTTTACATTTTCAATAGTGTCTGAAGGCTCTAC 642 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||| ||| | ||||||||||| | ||||| || || ||||||||| Sbjct 641 CTCAAGAGTAATGGTCTTGCCGGTAAGAGTTTTGACAAAGATTTGCATA 593 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | ||| | ||||| |||||| ||||| || |||||||| || Sbjct 1048 CCACCACGGAGACGAAGAACCAGATGAAGTGTAGACTCTTTCTGAATGTTGTAGTCAGAA 989 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || | ||||| || ||||| |||||| |||||||||| |||||||| || || Sbjct 988 AGAGTGCGTCCA-TCTTCCAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGATCTGGGGG 930 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||||||||| || || ||| | | || | ||||||| || || || Sbjct 929 AATGCCTTCTTTGTCCTGGATCTTGGCTTTCACATTCTCTATGGTGTCCGAAGGCTCCAC 870 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | |||||||| || | || || || || || ||||| Sbjct 869 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 822 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | || || |||| || |||||||| || |||||||| || Sbjct 592 CCACCACGCAGACGTAGCACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAA 533 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||||| ||||| ||||| || ||||| |||||||||||||||| || ||||| Sbjct 532 AGTGTGCGGCCATCTTCAAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCTGGAGGG 473 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||||||||| || || ||| | | ||| | ||||| | |||||| ||| Sbjct 472 ATGCCTTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATGGTGTCTGAGGGTTCAACT 413 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | || || || || | || || ||||| || ||||| Sbjct 412 TCTAGGGTTATTGTTTTTCCCGTGAGGGTCTTCACGAAAATCTGCAT 366 Score = 95.1 bits (104), Expect = 1e-14 Identities = 104/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||| | ||| | ||||| ||||| ||||| || |||||||| ||| Sbjct 139 GCCACCACGCAGACGAAGAACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGA 80 Query 143017 CATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | |||| || | ||||| || ||||| |||||| ||||||| || ||||| || || | Sbjct 79 AAGAGTGCGTCCA-TCTTCAAGCTGTTTCCCAGCAAAGATCAGGCGCTGCTGGTCTGGGG 21 Query 143076 GTATGCCTTCTTTGTC 143091 | |||||||||||||| Sbjct 20 GAATGCCTTCTTTGTC 5 >seq1085090 Length=701 Score = 82.4 bits (90), Expect = 8e-11 Identities = 89/117 (76%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| | ||||| ||| || ||||| || |||||||| || | ||| || ||||| Sbjct 229 AACCAGATGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGACCG--TCTTC 286 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 || ||||| ||||| |||||||||||||||| || || || ||||||||||||| Sbjct 287 CAGCTGTTTCCCAGCGAAGATCAGACGTTGCTGGTCTGGGGGAGTGCCTTCTTTGTC 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499877183641920