Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq892534 127 3e-24 seq875660 95.1 2e-14 seq1109944 93.3 6e-14 seq31215 86.0 9e-12 >seq892534 Length=7065 Score = 127 bits (140), Expect = 3e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 96894 CCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAG 96953 || |||||| | ||||||||| |||| || |||||||||||| || ||||||| | || Sbjct 4544 CCGGGCGCTTTCGCCGTCTACCTGGAGCCGTGGCACGCGGACATTCTTGACTTCCTGGAC 4485 Query 96954 ATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGG 97013 || | || ||| | ||| |||||| | || ||| |||||||||| || || || ||| Sbjct 4484 CTGAGGAAGAACACGGGCAAGGAAGAGTCGCGGGCCCGGGACTTGTTCTACGCCCTGTGG 4425 Query 97014 GTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCC 97073 ||||| || | |||||| |||| || | | | | |||||| ||| ||||| || Sbjct 4424 GTGCCGGACCTCTTCATGCAGCGGGTGGAGCAGAACGCCCACTGGACCCTCATGTGTCCG 4365 Query 97074 GACTCGTCACCCGGTCTGTCCGAT-TGCTGGGGCGAAGAGTTTGAGGCC 97121 ||| || ||||| || || || ||| ||| || |||||||||||| Sbjct 4364 GACGAGTGCCCCGGCCTCTCGGACGTGCACGGG-GAGGAGTTTGAGGCC 4317 >seq875660 Length=2170 Score = 95.1 bits (104), Expect = 2e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 97208 AGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACG 97267 ||| ||||| || || ||||| || ||||||||| || |||||||| |||||| | Sbjct 256 AGAAACTGGGACCCCCTACATGCTGTACAAGGATGCCTGTAATCGCAAGTCCAACCAGCA 315 Query 97268 CCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||||||||||||||| || ||| ||||||||||| || || |||||| Sbjct 316 GAACTTGGGCACCATCAAGTGCAGCAACCTGTGCACGGAGATCGTGGAGTAC 367 >seq1109944 Length=1004 Score = 93.3 bits (102), Expect = 6e-14 Identities = 135/186 (73%), Gaps = 15/186 (8%) Strand=Plus/Plus Query 125010 TATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAG 125069 || |||||||||||| |||||||||| || || |||| || || ||||| | || ||| Sbjct 317 TACCATGACATTTGGAAAATGTACAAGAAAGCGGAGGCATCATTCTGGACAGCGGAGGAG 376 Query 125070 GTCGATCTGTCCAAGGACCTG-TACGATTGGGAGACTCGTTTGACTGAAA-CTGAGCGAG 125127 || ||||| ||||||||| || ||| | |||||| | ||||||| ||||| ||| Sbjct 377 GTGGATCTTTCCAAGGACTTGATAC-ACTGGGAGGC-------ACTGAAATCTGAG-GAG 427 Query 125128 ----AGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGAC 125183 | || ||||| || | |||| |||||||| | | ||||| || ||||| || Sbjct 428 AAGCATTTCATATCTCATGTGCTGGCATTCTTTGCTGCCAGTGATGGCATAGTCAATGAA 487 Query 125184 AATCTG 125189 ||| || Sbjct 488 AATTTG 493 >seq31215 Length=2442 Score = 86.0 bits (94), Expect = 9e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 96906 GCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAAC 96965 ||| ||||| |||| || |||||||||||| | |||||||| | || || || ||| Sbjct 1891 GCCATCTACCTGGAGCCCTGGCACGCGGACATCTTTGACTTCCTGGACCTGAAGAAGAAC 1832 Query 96966 TCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTG 97025 |||| || ||| | || || ||||| |||| || || | ||| | ||||| || Sbjct 1831 ACTGGGAAGGAGGAGACGCGGGCTCGGGACCTGTTCTACGCCATGTGGATCCCAGACCTG 1772 Query 97026 TTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCC 97085 ||||||||| | || | || || |||||| | | ||||||||| | | || Sbjct 1771 TTCATGAAGAGGGTGGAGGAGAACGGAGACTGGACCTTGATGTGCCCCAATGAATGTCCT 1712 Query 97086 GGTCTGTCCGATTGCTGGGGCGAAGAGTTTGA 97117 || ||| ||| |||||||| |||||||| Sbjct 1711 GGACTGCACGAAGTGTGGGGCGAGGAGTTTGA 1680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 730627346694560