Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq688428 134 1e-26 >seq688428 Length=1164 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||| | || | | ||| | ||||||||||| ||||| || ||||||||||| Sbjct 822 TGCCACCACGCAGACGAAGAACCAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTG 763 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | | | | ||||||| | ||| |||||||| | ||||||||||| ||||| || Sbjct 762 ACAAAGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAAACGTTGCTGGTCTGGTG 703 Query 15255 GAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 |||| ||||| ||||| ||||| ||| |||||| |||| || || || | ||| Sbjct 702 GAATGCCTTCCTTGTCCTGGATTTTAGCT-TTTACATTTTCAATAGTGTCTGAAGGCTCT 644 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || | |||||||| || || || |||||||| ||||| ||||||||| Sbjct 643 ACCTCAAGAGTAATGGTCTTGCCGGTAAGAGTTTTGACAAAGATTTGCATA 593 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | || | || || || ||||||||||| ||||| || |||||||| || Sbjct 592 CCACCACGCAGACGTAGCACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAA 533 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| | ||| ||||||||| | |||| |||||| ||||| || Sbjct 532 AGTGTGCGGCCATCTTCAAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCTGGAGGG 473 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| || ||| || ||| |||| ||||| || ||| || Sbjct 472 ATGCCTTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATGGTGTCTGAGGGTTCAACT 413 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| ||| || ||||| || || || || || || ||||| ||||| Sbjct 412 TCTAGGGTTATTGTTTTTCCCGTGAGGGTCTTCACGAAAATCTGCAT 366 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| || || ||||| || |||||||| || ||| | | | ||||| Sbjct 1031 AACCAGATGAAGTGTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGTCCATCTTC 972 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||||||||||| | |||| ||| || || || ||||| ||||||||||| Sbjct 971 CAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTG 912 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||| || ||| | |||||||| || | || || || | || ||||| || Sbjct 911 GATCTTGGCTTTCACATTCTCTATGGTGTCCGAAGGCTCCACCTCAAGAGTGATGGTCTT 852 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || || ||||| || ||||| Sbjct 851 GCCAGTGAGGGTCTTCACAAAGATCTGCAT 822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357208280972796