Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq688428 178 3e-39 >seq688428 Length=1164 Score = 178 bits (196), Expect = 3e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | |||||| ||||||||||| || |||||||| ||||| | || || Sbjct 1034 AAGAACCAGATGAAGTGTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGTCCATC 975 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || ||||| |||||||| || || | ||| ||||| || || || |||||||| || Sbjct 974 TTCCAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCTTTGTC 915 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| ||||| ||||| |||| ||| || ||| || ||||| || || || || Sbjct 914 CTGGATCTTGGCTTTCACATTCTCTATGGTGTCCGAAGGCTCCACCTCAAGAGTGATGGT 855 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || ||||| |||||||| Sbjct 854 CTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 822 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || |||||||||||||| || || || || | ||| | ||||| Sbjct 806 AAGAACCAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCGTC 747 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| ||||| || ||||||||||| | | || || || || || || ||||| || || Sbjct 746 TTCCAGTTGCTTGCCAGCAAAAATCAAACGTTGCTGGTCTGGTGGAATGCCTTCCTTGTC 687 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| || || |||||||||||||| | || || ||| |||||||| || ||||| || Sbjct 686 CTGGATTTTAGCTTTTACATTTTCAATAGTGTCTGAAGGCTCTACCTCAAGAGTAATGGT 627 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || ||||| ||||| ||||| || ||||| Sbjct 626 CTTGCCGGTAAGAGTTTTGACAAAGATTTGCAT 594 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || || ||||| || || || | || ||||| ||||| || ||| Sbjct 562 GTGGATTCTTTCTGGATGTTGTAGTCTGAAAGTGTGCGGCCATCTTCAAGTTGCTTGCCA 503 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | || || || ||||| || |||||||| || || ||||| ||||| Sbjct 502 GCGAAGATCAGACGTTGCTGGTCTGGAGGGATGCCTTCTTTGTCTTGGATCTTGGCTTTA 443 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||| || ||||| || ||||| || || || || || || || || Sbjct 442 ACATTTTCAATGGTGTCTGAGGGTTCAACTTCTAGGGTTATTGTTTTTCCCGTGAGGGTC 383 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 382 TTCACGAAAATCTGCAT 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1134785017850448