Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq688428 105 6e-18 seq577393 89.7 5e-13 >seq688428 Length=1164 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| ||||||||||| || ||||||| | | ||||||||||| ||||| |||||||| Sbjct 977 ATCTTCCAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCTTT 918 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || || || || | | ||||| | | || || |||| ||||| Sbjct 917 GTCCTGGATCTTGGCTTTCACATTCTCTATGGTGTCCGAAGGCTCCACCTCAAGAGTGAT 858 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||| || ||||| || || ||||||||||||||||||| Sbjct 857 GGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGC 820 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | || ||||| || || | ||| ||||| || |||| | || ||| Sbjct 802 ACCAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCGTCTTCC 743 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || || || |||| || || | |||||| ||||| ||||| ||||| ||||| | Sbjct 742 AGTTGCTTGCCAGCAAAAATCAAACGTTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGG 683 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| || || || | | |||||| | | || || |||| || ||||| || Sbjct 682 ATTTTAGCTTTTACATTTTCAATAGTGTCTGAAGGCTCTACCTCAAGAGTAATGGTCTTG 623 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||||||||| |||||||| ||||| Sbjct 622 CCGGTAAGAGTTTTGACAAAGATTTGCAT 594 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||| | || ||||| || || | ||| || || | | ||||| | ||| Sbjct 575 CACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTC--TGAAAGTGTGCGGCCATCT 518 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || || || || || | ||||| | | |||||| |||||||| || ||||||||||| Sbjct 517 TCAAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATGCCTTCTTTGTCT 458 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || || || || | | ||||| | | | || || || | || || ||| Sbjct 457 TGGATCTTGGCTTTAACATTTTCAATGGTGTCTGAGGGTTCAACTTCTAGGGTTATTGTT 398 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| || || || ||||| || |||||||||| Sbjct 397 TTTCCCGTGAGGGTCTTCACGAAAATCTGCATGC 364 >seq577393 Length=1095 Score = 89.7 bits (98), Expect = 5e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 115610 TGCTCCAGGTGAGGATCGAACTCACAACCTTGGCATTATAAGTACCACGCGCT-GCCGAT 115668 ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||| Sbjct 974 TGCTCCAGGCGAGGATCGAACTCACAACCTCCGCATTATAAGTACGGCGCGCTAACCGAT 1033 Query 115669 TGCGCTACTGGAGC 115682 | ||| |||||||| Sbjct 1034 TACGCCACTGGAGC 1047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441980627192160