Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_006936.1 Length=36674 Score E Sequences producing significant alignments: (Bits) Value seq481546 104 5e-18 >seq481546 Length=7382 Score = 104 bits (114), Expect = 5e-18 Identities = 442/688 (64%), Gaps = 23/688 (3%) Strand=Plus/Plus Query 34122 TGACGAATCTCAACATACGAGGGCTAAAACATACACCGATATTTTAGACTATTACAGTGA 34181 ||||||| | || || | | ||||||||| || | | || | || |||| | | Sbjct 5075 TGACGAAACCCACCACAGTAAGGCTAAAACTTATCGCAAAATATATGATTATTTCTCAAA 5134 Query 34182 TGTTCCAAGATTAGGCTTTTCAGGTTCTCCGTGGCGCATGAATGGTCAGGGGTTCGATGA 34241 |||||| ||| | || ||| | | | || ||||| |||||||| || || || || || Sbjct 5135 TGTTCCGAGACTTGGTTTTACTGCCACACCATGGCGTATGAATGGACAAGGATTAGACGA 5194 Query 34242 TATTTACCCAGCAATGGTTGAAGGCCCTAGCGTGAAATGGTTGATTGATAACTATCATTT 34301 |||||| | ||| |||| || | ||| | ||||| || | || || || | Sbjct 5195 CATTTACGACTCGATGATTGAGGGTAAAAACGTTAGCTGGTTAATAGCCCACCATTATCT 5254 Query 34302 AGCGCCAT-TCACGTATTACGCACCGCAAACGCTTGAAGGTT-----TTAAAAAAC---- 34351 | | |||| ||| ||||||| | || |||| | | |||||||| Sbjct 5255 ATCACCATATCA-GTATTACTCGGTAAAACTTGTTGATGATAGTAAATTAAAAAAATCGA 5313 Query 34352 GTAATGGCGAATACGATAAGAAGTCAGTTGATGAAGTG-TTGGGAAGTAAGATATTCGGA 34410 ||| || || ||| | |||||| | || |||| ||||||| | ||| || || Sbjct 5314 GTACCGGTGATTACACCAGTAAGTCAATGGACGAAGCAATTGGGAAA-ACGATTTTTGGT 5372 Query 34411 GACGCCGTCAGCTCGTATCTAAGCAATGCTAATGGTAAACAGGCAATCTTATACGCCCAC 34470 || | || | | |||| || || ||||||| | | || ||||| | ||||| || Sbjct 5373 GATGTTGTTAAAACCTATCGAACAAAGGCTAATGATCAGCAAGCAATTGTTTACGCGCAT 5432 Query 34471 TCGGTAGAATAC-GCTAAAAAGTAC-GCTGTGGCGTTTGAAGAAGCCGGAGTTAATGCTG 34528 || || ||| || || ||| |||| || || || | ||||| || || | Sbjct 5433 GATGTGGAGTACAGCCAAGC--TACAGCTGAAGCTTTCAAAAATGCCGGTATTTCAGCAG 5490 Query 34529 CAAGTGTTGATGGTAAGACACCTAAAGCAGAACGCGATCGGATAATTAATGATTTTCGCA 34588 | |||||| | ||| || |||||| || || | |||||| | ||| ||| Sbjct 5491 TACATGTTGACGCTAAAACGCCTAAAACAATCCGAAACTCGATAATGAGTGACTTTAAAT 5550 Query 34589 GCGGAAAATTGAAAGTGCTATGCAATAATGATTTGATTTCCGAGGGTTTCGATGTTCCTA 34648 |||||| | ||||| |||||||| ||| | |||||||| || || | ||||| Sbjct 5551 CGGGAAAAATTAAAGTTCTATGCAACGTGGATCTTATTTCCGAAGGATTTAACGTTCCAG 5610 Query 34649 ATTGCGAAGTTGTCATCATGTGCCGGCCTACTGCTTCGTTAGTACTTTATTTACAGCAGT 34708 ||||| || ||||||||| | || |||| ||| | || | | | || |||| Sbjct 5611 ATTGCTCGGTAGTCATCATGCTAAGACCAACTGAATCGCTGGTCTTAGACATTCAACAGT 5670 Query 34709 CGATGCGTTGTATGCGCTATGTCAA---TGGCAAGCAAGCAATGATAATCGACCATGTTG 34765 ||||||| |||||| | || ||| ||| || || | || ||||||||||||| Sbjct 5671 CGATGCGGTGTATGAGATA---CAAGCCTGGTAAAATGGCGACCATTATCGACCATGTTG 5727 Query 34766 GTAATTATGTTAGATTTGGCTTGCCAGA 34793 ||| ||| | ||||| |||||||| Sbjct 5728 CTAACTATTCGCGTTTTGGGTTGCCAGA 5755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115667401653792