Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq688428 125 6e-24 seq996534 93.3 4e-14 >seq688428 Length=1164 Score = 125 bits (138), Expect = 6e-24 Identities = 153/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||| | ||||| || |||| || | || || ||| | || Sbjct 594 ATGCAAATCTTTGTCAAAACTCTTACCGGCAAGACCATTACTCTTGAGGTAGAGCCTTCA 653 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || | || |||| |||| || ||||| ||||| |||||||| ||| Sbjct 654 GACACTATTGAA--AATGTAAAAGCTAAAATCCAG-GACAAGGAAGGCATTCCACCAGAC 710 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | |||||||| ||||| ||| | ||||| | |||||| || |||||| Sbjct 711 CAGCAACGTTTGATTTTTGCTGGCAAGCAACTGGAAGACGGCCGCACTTTGTCAGATTAC 770 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || ||||| ||||||||||| || || Sbjct 771 AACATTCAGAAAGAATCCACCCTTCA 796 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| | || |||||| | || Sbjct 822 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTGGAGCCTTCG 881 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| |||| || ||| ||||||||||| ||||| || || || Sbjct 882 GACACCATAGAGAATGTGAAAGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGATCAG 941 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| |||||||| | ||||||| |||||| | || ||||| Sbjct 942 CAGCGTCTGATCTTTGCTGGCAAACAGCTGGAAGATGGACGCACTCTTTCTGACTACAAC 1001 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| ||||| || || || ||| | || || Sbjct 1002 ATTCAGAAAGAGTCTACACTTCATCTGGTTCT 1033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/216 (69%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || ||| | || || | ||||| || | || Sbjct 366 ATGCAGATTTTCGTGAAGACCCTCACGGGAAAAACAATAACCCTAGAAGTTGAACCCTCA 425 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || | || |||| || | || ||||||||||| || || || ||| Sbjct 426 GACACCATTGAA--AATGTTAAAGCCAAGATCCAA-GACAAAGAAGGCATCCCTCCAGAC 482 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || || || ||||| ||| | ||||||| ||||| | || ||| Sbjct 483 CAGCAACGTCTGATCTTCGCTGGCAAGCAACTTGAAGATGGCCGCACACTTTCAGACTAC 542 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || || || ||||||||||| || || || |||||| Sbjct 543 AACATCCAGAAAGAATCCACCCTTCACTTGGTGCTA 578 >seq996534 Length=11342 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 51090 ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGC 51149 |||||| ||| ||||||||||||||||||| | |||| | ||||| ||| | ||||| Sbjct 9609 ACCCACGTAACCATTAGGATCGCGACCATCCAGGTTGTACTTGTCGTTGAGATAGATGGC 9668 Query 51150 ATAACCCAATGCCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACAT 51209 | || ||| |||| |||||||| |||| || ||||||||||||||||| Sbjct 9669 TTCCTTCAGTGCTTCTTCTGGGGACGGCGTCCACTCCAGGATCTTCTTGGCCCAGTACAT 9728 Query 51210 GCGCATGTAACCGTGCATCTTGCCCTCGC 51238 | | | | || ||||||||||||| || Sbjct 9729 CCTTAGGAAGCCATGCATCTTGCCCTTGC 9757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427380561825140