Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1109944 138 1e-27 >seq1109944 Length=1004 Score = 138 bits (152), Expect = 1e-27 Identities = 172/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 ||| | ||||||||||||||| ||||| || ||||| || |||| | ||| ||| Sbjct 496 TACCAAATTTTCATTGACTATGCCATCACTGGCAGCAAAGAATGCCAGCACATGAGATAT 437 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGAT-AGATCTTTTGAAAGATCGA 93593 ||||| ||||| ||| ||| || ||||| | | || | || || |||||||| | Sbjct 436 GAAATGCTTCTCCTCAGATTTCAGTGCCTCCCAGT-GTATCAAGTCCTTGGAAAGATCCA 378 Query 93594 CTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGAT 93653 | || || | ||||| || ||||| || ||||| |||||||| | ||| ||||| || | Sbjct 377 CCTCCTCCGCTGTCCAGAATGATGCCTCCGCTTTCTTGTACATTTTCCAAATGTCATGGT 318 Query 93654 ATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706 ||| ||| ||||||| ||||||||| ||||| ||||| |||| |||||| Sbjct 317 ATTCAATAGGAAATACCACAAAACGACGTGGGTTTTCTTTCAGTAGAGGCTCT 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549021898361440