Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq688428 113 4e-20 seq1085090 86.0 6e-12 >seq688428 Length=1164 Score = 113 bits (124), Expect = 4e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||| ||| || || || | ||||| ||||||||||| || ||||||||||| || Sbjct 748 TCTTCCAGTTGCTTGCCAGCAAAAATCAAACGTTGCTGGTCTGGTGGAATGCCTTCCTTG 689 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 || || ||||| ||| | ||| | ||||| |||| ||| || || ||||||| Sbjct 688 TCCTGGATTTTAGCTTTTACATTTTCAATAGTGTCTGAAGGCTCTACCTCAAGAGTAATG 629 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || |||||||| |||||||| ||||| |||||||| Sbjct 628 GTCTTGCCGGTAAGAGTTTTGACAAAGATTTGCAT 594 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195 || || || ||||| || ||||| || || || ||| || | | ||| || | || Sbjct 568 TGAAGGGTGGATTCTTTCTGGATGTTGTAGTC--TGAAAGTGTGCGGCCATCTTCAAGTT 511 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 | || || ||| | |||| ||||||||||| || || ||||||||||| ||||| || | Sbjct 510 GCTTGCCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATGCCTTCTTTGTCTTGGATCT 451 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | ||| | ||| | |||||| || | || ||||| || || | ||||| || | Sbjct 450 TGGCTTTAACATTTTCAATGGTGTCTGAGGGTTCAACTTCTAGGGTTATTGTTTTTCCCG 391 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || || ||||| ||||| Sbjct 390 TGAGGGTCTTCACGAAAATCTGCAT 366 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||| ||||| || || | |||| || ||||| || || |||||||||||||| Sbjct 977 ATCTTCCAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCTTT 918 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || || || || ||| | |||| |||||| |||| ||| || || ||||| | Sbjct 917 GTCCTGGATCTTGGCTTTCACATTCTCTATGGTGTCCGAAGGCTCCACCTCAAGAGTGAT 858 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || || || || ||||| || ||||| Sbjct 857 GGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 822 >seq1085090 Length=701 Score = 86.0 bits (94), Expect = 6e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 45216 CGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACG 45275 ||||||||||| | || |||||||||||| || || ||||| | ||| | ||||| || Sbjct 543 CGTTGCTGGTCTGACGCAATGCCTTCTTTGTCCTGGATTTTCTTTTTTACAGCTTCGACA 602 Query 45276 GTGTCGGAAGACTCGACTTC-GAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAAT 45334 || ||||||| ||| || || || |||| || ||||| || || || || ||||| || Sbjct 603 GTATCGGAAGGCTCCACCTCAAAGTGTAA-GGTCTTGCCAGTGAGGGTCTTCACAAAGAT 661 Query 45335 TTGCAT 45340 ||||| Sbjct 662 CTGCAT 667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445640373553760