Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq892534 87.8 2e-12 seq875660 86.0 8e-12 seq528558 84.2 3e-11 >seq892534 Length=7065 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727 || |||||||||||||| || || | || ||||| || || || || ||||| Sbjct 4312 TACAGGGCCTCAAACTCCTCCCCGTGCACGTCCGAGAGGCCGGGGCACTCGTCCGGACAC 4371 Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787 | ||| | ||| || | || ||| ||||||| |||||||||||| || | ||| || Sbjct 4372 ATGAGGGTCCAGTGGGCGTTCTGCTCCACCCGCTGCATGAAGAGGTCCGGCACCCACAGG 4431 Query 116788 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 || |||| | ||||| || | ||||| | ||| || | || |||| Sbjct 4432 GCGTAGAACAAGTCCCGGGCCCGCGACTCTTCCTTGCCCGTGTTCTTCCTCAGGTCCAGG 4491 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 116890 ||||| | || |||||||||||||| |||||||| || |||| Sbjct 4492 AAGTCAAGAATGTCCGCGTGCCACGGCTCCAGGTAGACGGCGA 4534 >seq875660 Length=2170 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 116460 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 116519 ||| |||||| ||||||| | || ||||| |||| || | ||| |||||||| Sbjct 382 CTCGTCCTTACTGCTGTACTCCACGATCTCCGTGCACAGGTTGCTGCACTTGATGGTGCC 323 Query 116520 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCC 116579 |||||||| || || ||||| ||||| ||||||||||| ||||| || || ||||| Sbjct 322 CAAGTTCTGCTGGTTGGACTTGCGATTACAGGCATCCTTGTACAGCATGTAGGGGGTCCC 263 Query 116580 CGTCTCCGTTTGGGACT 116596 || || || || |||| Sbjct 262 AGTTTCTGTCTGTGACT 246 >seq528558 Length=3392 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 |||| || | | |||||| ||||| ||| || |||||||||| || ||||||| Sbjct 1175 CCTCATCTCTGCTGATGAGCTCATTGCTGAAAGTGAGGCCTGGCATGATTCCTCGCTTCT 1234 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 ||| |||||| || || || || |||||||||||||||||||||||| ||||| | Sbjct 1235 TCAGCCAGAAGATGGCTGCGAAGGACCCAGAGAAGAAGATCCCCTCCACAGCAGCGAAGG 1294 Query 127659 C 127659 | Sbjct 1295 C 1295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604870889820960