Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq177838 114 1e-20 seq635738 93.3 3e-14 >seq177838 Length=30673 Score = 114 bits (126), Expect = 1e-20 Identities = 299/447 (67%), Gaps = 23/447 (5%) Strand=Plus/Minus Query 29904 AGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCC-GACCTCTGGTAGA 29962 |||||||||||| ||||| | || ||||| || || | |||||| ||||| ||| | | Sbjct 18723 AGAGTAGCTGGCTATGTTGTACGGCACCCCCAGGCCAACATCCCCCTGACCTTTGGAACA 18664 Query 29963 GCTGACACGAGAG---CTCTCCGTCGCTCACG-TAAAACTGACACATGGTGTGGCACGGA 30018 || | | || || || ||| ||| | || ||| | | ||||| ||| Sbjct 18663 TGTGCCTGCACAGGTACTTTCTGTCATACACCCTGAAGACCACAGA-GAAATGGCAAGGA 18605 Query 30019 GGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCT 30078 || | |||||| || ||||| ||| |||| |||||| | | | || ||| Sbjct 18604 GGCAAAGCCATTTTGCGGGTATCTTTAGGGCTCCACAAGCACACTACGTTCCGTCTGCTG 18545 Query 30079 TCTGGGTTGTTCCTGATGAGGTCC---ACGGCGTTTTGCAGCTGATCCACCCCCATCCCC 30135 ||||||| | |||| ||| | || || | | || | || ||||| ||| Sbjct 18544 TCTGGGTCTT--CTGA-GAGTAACCTAACAGCCTCTGACAATTAGTCTACCCCTTGGCCC 18488 Query 30136 GAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTAC 30195 ||||||| ||| |||| | |||| || || || |||||||| ||| |||||||| Sbjct 18487 ATGTAGTCTTCCCACATGCCTCTGTATTCAGCCCCCGAATGCCTCATCTGAAACCCGTAA 18428 Query 30196 ACCGGTCCCAGGTCTCCCTCTTCCCTGTGC-TCGAAGCCCCTCTTGTCCAAAAAGTCTCT 30254 |||| |||||||| || ||||| ||| || | ||||| ||||||| ||||||||| Sbjct 18427 CCCGGACCCAGGTCCCCTTCTTCGTAATGCGTCAGACCCCCT-TTGTCCAGAAAGTCTCT 18369 Query 30255 GGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA 30314 ||| ||| | | ||||||||| | || ||||||| ||| ||| || || Sbjct 18368 GGAGGTGTTATCTTTCCAGATCTTGA---------AGGTGAGCTCTGTGGTGTTAGTAGA 18318 Query 30315 CCCTCTGACGAACCACAGCAGCTCCTC 30341 |||||| | || |||||| ||||| || Sbjct 18317 CCCTCTTAAGATCCACAGAAGCTCTTC 18291 >seq635738 Length=2508 Score = 93.3 bits (102), Expect = 3e-14 Identities = 130/181 (72%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 30208 TCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCG 30267 || || || ||||||| | || || |||||||||| ||||| | ||| |||||||| Sbjct 1129 TCACCTTCCTCCCTGTCGACAAAACCACTCTTGTCCAGGAAGTCGCGGGAGCCGTTGGCA 1188 Query 30268 TCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAAC 30327 |||||||| | || |||||| || ||||| || || ||| || |||| |||| Sbjct 1189 TCCCAGATGTGGACTTTCTTCTCTGACAGCTCCTTTCCATTGGTGTTTCCCCTGATGAAC 1248 Query 30328 CACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG-GAGGGGAAA 30386 ||||||| ||| ||||| || | ||| || || | |||||| || || | |||||| Sbjct 1249 CACAGCAACTCTTCCACCACCCCTCGCCAGAACACACGCTTGGTTGTAAGCAAAGGGAAA 1308 Query 30387 C 30387 | Sbjct 1309 C 1309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403009312713788