Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq105966 122 1e-21 seq892534 109 7e-18 seq31215 96.9 4e-14 >seq105966 Length=3820 Score = 122 bits (134), Expect = 1e-21 Identities = 96/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||| ||||||||| |||||| ||| | |||||| | ||||| ||| Sbjct 2538 GCAGCCAACTACCTGGACATCAAGGGTCTGCTGGATGTCACCTGCAAGACAGTGGCTAAC 2479 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || |||||||| ||||| ||||| ||||||||| ||| Sbjct 2478 ATGATCAAGGGCAAGTCCCCTGAGGAGATTCGCAAAACCTTCAACATCAAGAACG 2424 >seq892534 Length=7065 Score = 109 bits (120), Expect = 7e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 1628389 AGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC 1628448 |||||||| |||| |||||| | ||| | ||||| | | | || | || || Sbjct 4348 AGGCCGGGGCACTCGTCCGGACACATGAGGGTCCAGTGGGCGTTCTGCTCCACCCGCTGC 4407 Query 1628449 ATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTG 1628508 || |||||||| | |||||| ||||| || | ||| || ||||| ||| |||||| Sbjct 4408 ATGAAGAGGTCCGGCACCCACAGGGCGTAGAACAAGTCCCGGGCCCGCGACTCTTCCTTG 4467 Query 1628509 CCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568 || |||||| | ||||| || |||| | |||||| ||||||||||||||||||||| Sbjct 4468 CCCGTGTTCTTCCTCAGGTCCAGGAAGTCAAGAATGTCCGCGTGCCACGGCTCCAGGTAG 4527 Query 1628569 CAGGCAAAGGCGCCC 1628583 ||| || |||||| Sbjct 4528 ACGGCGAAAGCGCCC 4542 >seq31215 Length=2442 Score = 96.9 bits (106), Expect = 4e-14 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||||| ||||| || ||||| || ||||| |||||||||| || |||||| || | Sbjct 1783 TCCACATGGCGTAGAACAGGTCCCGAGCCCGCGTCTCCTCCTTCCCAGTGTTCTTCTTCA 1842 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 |||| || |||| | ||||| |||||||| |||||||||||| ||| ||||| || Sbjct 1843 GGTCCAGGAAGTCAAAGATGTCCGCGTGCCAGGGCTCCAGGTAGATGGCGAAGGCTCC 1900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6014721564851452