Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1109944 147 2e-30 >seq1109944 Length=1004 Score = 147 bits (162), Expect = 2e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 43684 AGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTA 43743 |||||| || | | ||||| || ||||| ||| |||| |||||||| ||| ||||||| Sbjct 280 AGAAAACCCACGTCGTTTTGTGGTATTTCCTATTGAATACCATGACATTTGGAAAATGTA 339 Query 43744 CAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGC 43803 ||| ||||| |||| ||||| |||||||| || || || ||| | | || ||||| Sbjct 340 CAAGAAAGCGGAGGCATCATTCTGGACAGCGGAGGAGGTGGATCTTTCCAAGGACTTGAT 399 Query 43804 ACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTT 43863 ||| ||| ||| | ||| | | || || ||||| |||||| || |||| || || Sbjct 400 ACACTGGGAGGCACTGAAATCTGAGGAGAAGCATTTCATATCTCATGTGCTGGCATTCTT 459 Query 43864 TGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAG 43902 |||||| || || || |||||||||||||||||||| || Sbjct 460 TGCTGCCAGTGATGGCATAGTCAATGAAAATTTGGTAAG 498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392000905966780