Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_028835.1 Length=38751 Score E Sequences producing significant alignments: (Bits) Value seq481546 138 3e-28 seq733401 116 9e-22 >seq481546 Length=7382 Score = 138 bits (152), Expect = 3e-28 Identities = 445/685 (65%), Gaps = 22/685 (3%) Strand=Plus/Plus Query 27420 ACTGATGAAACGCATCACAGCTTGGCAAAGACTTACCACAAAATCTACGACTATTACTCG 27479 ||||| ||||| || ||||| ||| || ||||| | |||||| || || |||| ||| Sbjct 5073 ACTGACGAAACCCACCACAGTAAGGCTAAAACTTATCGCAAAATATATGATTATTTCTCA 5132 Query 27480 GACGTTCCACGCTTAGGGTTTTCAGCAAGTCCATGGAGACTTTCAGGAAAGGGACTGGGG 27539 | ||||| | | || ||| | || | |||||| | | ||| | ||| | | Sbjct 5133 AATGTTCCGAGACTTGGTTTTACTGCCACACCATGGCGTATGAATGGACAAGGATTAGAC 5192 Query 27540 GATGTTTATGAAACCATGGTTGAGGGTCCAACAGTGAAATGGCTAATTGAACATCACTAC 27599 || |||| || | ||| |||||||| || || | ||| |||| | || || || Sbjct 5193 GACATTTACGACTCGATGATTGAGGGTAAAAACGTTAGCTGGTTAATAGCCCACCATTAT 5252 Query 27600 TTAGCACCTTTTGACTACTATGCGCCAACCTTAATTGACGTTGAAAAGCTAAAGAAATCA 27659 || |||| | | | || || || || | |||| | | || |||| ||||| Sbjct 5253 CTATCACCATATCAGTATTACTCGGTAAAACTTGTTGATGATAGTAAATTAAAAAAATCG 5312 Query 27660 TCAACTGGTGATTATTCCACGAAGTCGATTGATGAGGCAAATACGAAGATGATTTTTGGT 27719 || |||||||| ||| ||||| || || || |||| | ||| | |||||||||| Sbjct 5313 AGTACCGGTGATTACACCAGTAAGTCAATGGACGAAGCAATTGGGAAAACGATTTTTGGT 5372 Query 27720 GATGTTGTTAGTCATTACCAGAAGCTGGCAAACGGACGTCAAGCTATTGTCTATGCGCA- 27778 |||||||||| || | | ||| || | | ||||| ||||| || ||||| Sbjct 5373 GATGTTGTTAAAACCTATCGAACAAAGGCTAATGATCAGCAAGCAATTGTTTACGCGCAT 5432 Query 27779 ------CAGTATCAGCGAATCGCAATCAGTCGCAGAAGCGTTCAAGAATGCTGGTATCAA 27832 |||| |||| || || | || || ||||| ||||| ||||| ||||| Sbjct 5433 GATGTGGAGTA-CAGCCAA--GCTA-CA---GCTGAAGCTTTCAAAAATGCCGGTATTTC 5485 Query 27833 TGCCCTGCATGTTGATAGTAAGACACC----AGCTGGCGAACGTGCTGATATTATGCGCG 27888 || | |||||||| ||| || || | |||| | |||| ||| | | Sbjct 5486 AGCAGTACATGTTGACGCTAAAACGCCTAAAACAATCCGAAACT--CGATA--ATGAGTG 5541 Query 27889 GATTTAAAGATGGACAGATCAAGGTTATTAGTAATTGTGATCTCATATCCGAAGGGTTTG 27948 |||||| ||| | || || ||| | | || ||||| || |||||||| ||| Sbjct 5542 ACTTTAAATCGGGAAAAATTAAAGTTCTATGCAACGTGGATCTTATTTCCGAAGGATTTA 5601 Query 27949 ATGTTCCCGAATGTGGTGTTGTTATCATGCTTAGACCAACTGCTTCTCTTGTCCTTGACA 28008 | ||||| || || || || |||||||| |||||||||| || || ||| | |||| Sbjct 5602 ACGTTCCAGATTGCTCGGTAGTCATCATGCTAAGACCAACTGAATCGCTGGTCTTAGACA 5661 Query 28009 TTCAGCAATCGATGCGAGGAATGCGCTATAGACCGAACAAAAGAGCAATCATTATTGATC 28068 |||| || |||||||| | ||| | || | || |||| || | |||||| || | Sbjct 5662 TTCAACAGTCGATGCGGTGTATGAGATACAAGCCTGGTAAAATGGCGACCATTATCGACC 5721 Query 28069 ACGTTGCGAACGTTTATCGCTTTGG 28093 | ||||| ||| || || ||||| Sbjct 5722 ATGTTGCTAACTATTCGCGTTTTGG 5746 >seq733401 Length=1911 Score = 116 bits (128), Expect = 9e-22 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 31529 GAGTTCGAATTCAAACCAGAATTCAAGCTTTGGCTGTCAACAAACCACAAGCCAATTATT 31588 || |||||||| |||||| | || ||||| ||| | |||| ||||||||||||||||| Sbjct 1012 GAATTCGAATTTAAACCACAGTTTAAGCTGTGGTTAGCAACTAACCACAAGCCAATTATA 953 Query 31589 CGAGGAACAGATGATGGTATCTGGCGAAGGTTGATGCTGATTCCATT 31635 ||||| |||||||||||||| ||||| | || |||||||||||||| Sbjct 952 CGAGGCACAGATGATGGTATATGGCGGCGATTAATGCTGATTCCATT 906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122224918665336