Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq688428 93.3 4e-14 >seq688428 Length=1164 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| || || |||||| || || || || || | ||| || ||| | || || Sbjct 1030 ACCAGATGAAGTGTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGTCCATCTTCC 971 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||||||||| ||||| || ||||||||||| || | ||| | || ||||||||| | Sbjct 970 AGCTGTTTGCCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTGG 911 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || ||| | || | | || || | |||||| || | ||||| | || Sbjct 910 ATCTTGGCTTTCACATTCTCTATGGTGTCCGAAGGCTCCACCTCAAGAGTGATGGTCTTG 851 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || |||||||| ||||| Sbjct 850 CCAGTGAGGGTCTTCACAAAGATCTGCAT 822 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| || || |||||| || || || || |||| ||| || ||| | || ||| Sbjct 120 ACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCTTCA 61 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 |||||||| || ||||| || || ||||||||||| | ||| | || ||||||||| Sbjct 60 AGCTGTTTCCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423650075364428