Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1122272 116 5e-21 seq1109944 114 2e-20 >seq1122272 Length=1600 Score = 116 bits (128), Expect = 5e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 |||||||||| || || || ||||| || |||||||| ||||| || ||||| ||||| Sbjct 875 CCAAATTCTCGTTCACAATGCCATCGCTGGCAGCAAAGAATGCCAACACATGAGAAATAA 934 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 ||| | || | | ||| || | ||||| | | ||||| || | ||| || | Sbjct 935 AATGCCTCTCCTCTGGTTTCAAGTTTTCCCAGTGTGTCAAGTCTTTGGAGAGATCCACCT 994 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 | ||||||||||| || |||||||| || || || ||||| ||||| |||||| ||||| Sbjct 995 CCTCAGCTGTCCAGAAGGATGCCTCAGCCTTCTTGTACATCTTCCAGATATCATGGTATT 1054 Query 48703 GGATTGGGAAAATAACAAA 48721 || || || | |||||| Sbjct 1055 CAATGGGAAACACAACAAA 1073 >seq1109944 Length=1004 Score = 114 bits (126), Expect = 2e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 ||||||| ||||| ||||| |||||||| |||||||| ||||| | ||||| || | Sbjct 494 CCAAATTTTCATTGACTATGCCATCACTGGCAGCAAAGAATGCCAGCACATGAGATATGA 435 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 ||| || || | || ||||| | ||||| | | || || || | ||| || | Sbjct 434 AATGCTTCTCCTCAGATTTCAGTGCCTCCCAGTGTATCAAGTCCTTGGAAAGATCCACCT 375 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 | || |||||||| ||||||||||| ||||| || ||||| ||||| || ||| ||||| Sbjct 374 CCTCCGCTGTCCAGAATGATGCCTCCGCTTTCTTGTACATTTTCCAAATGTCATGGTATT 315 Query 48703 GGATTGGGAAAATAACAAATCTATTTGGATTTT 48735 || || || | ||||| | | ||| |||| Sbjct 314 CAATAGGAAATACCACAAAACGACGTGGGTTTT 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684889982035840