Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1122272 132 7e-26 seq1109944 123 4e-23 >seq1122272 Length=1600 Score = 132 bits (146), Expect = 7e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 ||||||||| ||||| || ||||| || |||||||| |||||||| ||||| |||||| Sbjct 876 CAAATTCTCGTTCACAATGCCATCGCTGGCAGCAAAGAATGCCAACACATGAGAAATAAA 935 Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 47132 || | || || | ||| || | ||||| | | ||||| || | ||| || || Sbjct 936 ATGCCTCTCCTCTGGTTTCAAGTTTTCCCAGTGTGTCAAGTCTTTGGAGAGATCCACCTC 995 Query 47133 TTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTG 47192 |||||||||||||| || ||||| || || || ||||| ||||| |||||| | |||| Sbjct 996 CTCAGCTGTCCAGAAGGATGCCTCAGCCTTCTTGTACATCTTCCAGATATCATGGTATTC 1055 Query 47193 GATCGGAAAAATAACAAA 47210 || ||||| | |||||| Sbjct 1056 AATGGGAAACACAACAAA 1073 >seq1109944 Length=1004 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 |||||| ||||| ||||| |||||||| |||||||| ||||||| ||||| || || Sbjct 493 CAAATTTTCATTGACTATGCCATCACTGGCAGCAAAGAATGCCAGCACATGAGATATGAA 434 Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 47132 || || || || | ||||| | ||||| | | || || || | ||| || || Sbjct 433 ATGCTTCTCCTCAGATTTCAGTGCCTCCCAGTGTATCAAGTCCTTGGAAAGATCCACCTC 374 Query 47133 TTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTG 47192 || |||||||||||||| ||||| ||||| || ||||| ||||| || ||| | |||| Sbjct 373 CTCCGCTGTCCAGAATGATGCCTCCGCTTTCTTGTACATTTTCCAAATGTCATGGTATTC 314 Query 47193 GATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATAGGTTC 47240 || ||||| | ||||| | | ||| |||| | |||| ||| || Sbjct 313 AATAGGAAATACCACAAAACGACGTGGGTTTTCTTTCAGTAGAGGCTC 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702898458097920