Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1521 84.2 2e-11 >seq1521 Length=375746 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 15940 CATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAAT 15999 |||||| || ||||| | || | |||||||||||||||||| |||||||| || || || Sbjct 340549 CATTTTCTGGTATTCCCCGACACGCTTTTCAAAGAAATTTGTCTTTCCTTCCAAGGATAT 340490 Query 16000 ATTTTCCATAAAATCAAAAGGATT 16023 | ||||||||| |||||||| || Sbjct 340489 GTGTTCCATAAAGTCAAAAGGGTT 340466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462467720257400