Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1034 116 3e-21 >seq1034 Length=671361 Score = 116 bits (128), Expect = 3e-21 Identities = 222/325 (68%), Gaps = 4/325 (1%) Strand=Plus/Plus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 ||| | || | ||| | || || ||||| | ||||| || || || || || ||||| Sbjct 244421 GAACTCTCCTCTCAGCTCTACCAGCGATCAGGCGATATCGGTCTTGGAGTGCCGTTCAAC 244480 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571 || ||||||||| |||| || || || ||||| || || || |||| | ||| | ||| Sbjct 244481 ATCGCAAGTTATTCGCTTCTGACTTACATGATAGCCCACGTAACAGGACTCAAACCTGGT 244540 Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAA 20631 || || || ||||| | |||||||| ||| | ||| | ||||| || ||||| | ||| Sbjct 244541 GATTTCGTTCACACACTGGGAGACGCACATGTCTACGTGAATCACATTGAACCACTGAAA 244600 Query 20632 TTACAGTTAACACGACAACCAAAACAATTCCCAA--CTCTTCGCATTACTCGAACTGTTA 20689 | ||| | || |||| || ||||||| ||||| || | || || | Sbjct 244601 ATTCAGCTCCAGAGAAAACCTCGACCTTTCCCAAAGCTCTTG--ATCAAACGTGAGGTGA 244658 Query 20690 AAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATT 20749 | || ||| ||||||||||| ||| ||||||| | | | || || ||||| ||| Sbjct 244659 AGGACATTGACGATTTTAAATTTGAAGATTTTGAGATTGTTGGGTACAATCCTCATCCAA 244718 Query 20750 CAATTCCAATGGAAATGTCTGTTTA 20774 ||| | ||||||||| | || || Sbjct 244719 AAATCGCCATGGAAATGGCAGTGTA 244743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399146738543755