Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1521 91.5 1e-13 >seq1521 Length=375746 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 11900 TATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAAT 11959 || ||||| || | ||| || |||||||| || || || ||||||||||| || || ||| Sbjct 339322 TAGGTATCAATGAGTAAGCTGTACATTTCGGAGTGGATGTTTTCCATAGCAATCTGGAAT 339263 Query 11960 CCATAGAAACATCGTGCCTCTGAACACTGTACATC 11994 |||||||||||||| ||||||| | |||||| || Sbjct 339262 CCATAGAAACATCGGGCCTCTGTAGCCTGTACTTC 339228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468479944606960