Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1521 93.3 6e-14 >seq1521 Length=375746 Score = 93.3 bits (102), Expect = 6e-14 Identities = 137/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 124999 TTCCCA-TCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 |||||| || ||| |||||||| ||| |||||||||| |||||| | ||||| || ||| Sbjct 338833 TTCCCAATCCAGTACCATGACATCTGGCAAATGTACAAGAAGGCTGAAGCCTCATTCTGG 338892 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | || ||||||||||| ||||| || ||| | ||||| ||| ||| || Sbjct 338893 ACTGCTGAGGAGGTCGATCTCTCCAAAGATCTGGGTCACTGGGAAGCTC---TGAAGGAC 338949 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 || | | | || || || || || | || || ||||| | | |||||||||||| Sbjct 338950 GAGGAACAACACTTCATTTCCCATGTTCTTGCTTTTTTTGCTGCCAGTGATGGAATCGTC 339009 Query 125178 AACGACAATCTG 125189 || || ||| || Sbjct 339010 AATGAAAATTTG 339021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740988252844840