Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1383 95.1 1e-14 >seq1383 Length=1214666 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| |||||||||||||| || || |||||||| || | ||| |||| || Sbjct 711482 ATGCAAATCTTTGTCAAAACGCTGACTGGCAAAACCATCACACTGGAAGTGGAGCCCTCA 711423 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || || || || || |||||||| | ||| |||||| Sbjct 711422 GACACCATTGAAAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGATCAG 711363 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | || | || || ||||| | ||||||| || | |||| || ||| Sbjct 711362 CAGAGATTGATCTTCGCCGGTAAACAGCTGGAAGATGGTCGCACTCTCTCCGACTACAAC 711303 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| || || | ||| |||| ||| | || ||||||| Sbjct 711302 ATTCAGAAAGAATCCACCCTCCATTTGGTCTTGCGTCTGAGAGGAGG 711256 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||||||||| || || || |||||||| || | ||| |||| || Sbjct 711931 ATGCAAATCTTTGTCAAAACACTGACTGGCAAAACCATCACACTGGAAGTGGAGCCCTCA 711872 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || || || || || |||||||| | ||| |||||| Sbjct 711871 GACACCATTGAAAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGATCAG 711812 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | || | || || ||||| ||||||||| | || | | || || ||| Sbjct 711811 CAGAGATTGATCTTCGCCGGTAAACAGCTAGAAGATGGCCGCACTCTCTCTGACTACAAC 711752 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| || || || || | ||| |||| ||| | || ||||||||| Sbjct 711751 ATTCAGAAGGAATCCACCCTCCATTTGGTCTTGCGTCTGAGAGGAGGAA 711703 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||||||||| || || || |||||||| || | ||| |||| || Sbjct 711254 ATGCAAATCTTTGTCAAAACACTGACTGGCAAAACCATCACACTGGAAGTGGAGCCCTCA 711195 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| || || || |||||||| | ||| |||||| Sbjct 711194 GACACCATTGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGATCAG 711135 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | || | || || ||||| | ||||||| || | | || || ||| Sbjct 711134 CAGAGATTGATCTTCGCCGGTAAACAGCTGGAAGATGGTCGCACACTCTCTGACTACAAC 711075 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||| || || || || | ||| |||| ||| | || |||||||||| Sbjct 711074 ATTCAGAAGGAATCCACCCTCCATTTGGTCTTGCGTCTGAGAGGAGGAAA 711025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425304296663080