Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2869 84.2 3e-11 >seq2869 Length=866877 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCT 204013 || || || || ||||||||||| || ||||| || ||||| ||||| | | || || Sbjct 626146 TTCGGCTCTGCAATGTGAATGTTTAGCGACTGACTCTGGTCTATGAATGCTCCTCGGTCG 626205 Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTC 204069 || ||||| || | | |||||||| || ||||||||||| |||||| ||| ||| Sbjct 626206 GCAGCCATCTTTAGCACTGTCTTCTGGGATATCTCCCACACAGTCTTGTACAAGTC 626261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795079073829040