Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq1994 82.4 9e-11 >seq1994 Length=36940 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 141250 GCCATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTC 141309 || ||||||| |||||||| || ||||| |||| ||||||| ||||| ||||||||||| Sbjct 5041 GCAATTCCTCGATAGCTCAGTGGTAGAGCAGACGGCTGTTAACCGTCTTGTCGTAGGTTC 4982 Query 141310 AAATCCTACCTGGGGAGT 141327 |||||||| | ||||| Sbjct 4981 GAATCCTACTCGAGGAGT 4964 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 141250 GCCATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTC 141309 || ||||||| |||||||| || ||||| |||| ||||||| ||||| ||||||||||| Sbjct 6459 GCAATTCCTCGATAGCTCAGTGGTAGAGCAGACGGCTGTTAACCGTCTTGTCGTAGGTTC 6400 Query 141310 AAATCCTACCTGGGGAGT 141327 |||||||| | ||||| Sbjct 6399 GAATCCTACTCGAGGAGT 6382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610338362136360