Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1352 268 6e-66 seq1378 181 7e-40 seq2829 170 1e-36 seq3501 163 2e-34 seq1971 147 1e-29 >seq1352 Length=73131 Score = 268 bits (296), Expect = 6e-66 Identities = 559/819 (68%), Gaps = 24/819 (3%) Strand=Plus/Plus Query 475367 ACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGT 475424 || ||||| ||| | ||| | || || || ||||||||| | ||| | || ||||| | Sbjct 60742 ACTGCTGGTGATACGCATTTAGGCGGAGAGGATTTTGATCACAGAATGGTGGATCAT--T 60799 Query 475425 GTGTTGAAGATTTCAAGAGGAAA---AATAAAGTTGATCTTTC--AACATCTGCTAAAGC 475479 |||| |||| || ||| | || ||||||| || |||| || ||| | | ||| Sbjct 60800 TTGTTCAAGAATTTAAGCGCAAGTACAATAAAG---ATATTTCGAAAAATCAG--AGAGC 60854 Query 475480 ATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCA 475539 | || ||||| ||| |||| ||||| || |||||| || | || || | | || | Sbjct 60855 TCTCAGGCGTCTAAGATCTGCATGTGAGCGCGCTAAGAGAACACTCTCAAATAGTTCTGA 60914 Query 475540 AACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAG 475599 | | ||||||| ||||| | | ||| || | ||||| | | | | ||| | | Sbjct 60915 GGCAAACATTGAAGTGGATTCATTATATGAGGGGACTGATTTTTACAGTAAAATTTCTCG 60974 Query 475600 GGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACA 475659 ||| ||||| || | ||| | ||| | || ||| || | ||||| || ||| | Sbjct 60975 TGCTCGCTTTGAGGAGTTGTGTGCCGATTTGTTCCGAAGTACTCTAGAACCTGTAGAAAA 61034 Query 475660 AGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGG 475719 || | |||||| | || || |||||||| ||||||||||| |||| || || || || Sbjct 61035 AGCGTTAAGAGATGCAAAGCTAGACAAATCCAAAGTCCATGAAGTTGTCCTGGTTGGCGG 61094 Query 475720 TTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTA-AAAAGT 475778 ||||| | || |||||||| ||| ||| | | |||| | ||| ||||| Sbjct 61095 ATCAACTCGGATCCCAAAAATCC---AAAAGCTACTACAAGATTTCATGGGTGGAAAAGA 61151 Query 475779 --TAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGC 475836 | ||| || | |||||||||||||||||||||||||| || ||||| |||||||| Sbjct 61152 ACTCAATAAATCAATCAATCCTGATGAAGCTGTTGCATATGGGGCAGCTGTACAAGCAGC 61211 Query 475837 TATTTTATCAGGTCAATCAG-ACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||||| | ||| || || | || | | | || || || | || ||||| || || | Sbjct 61212 CATTTTGACTGGT-GATGAGCATGAAACAATCAAGGATGTTCTTCTGGTTGATGTTACAC 61270 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 | || || | ||| ||||||||| ||||| | |||||||| | || || |||||| Sbjct 61271 CGCTGTCTCTTGGTATTGAAACAGCAGGAGGAGTGATGACTAAATTGATAGAACGAAATA 61330 Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTG 476015 | |||||| ||| |||| | | ||| | || ||| | || || || || | Sbjct 61331 CAAAAATCCCAACTAAAGCATCACAGATTTTTACTACATATGCAGACAACCAGCCAGGAG 61390 Query 476016 TAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAA 476075 | |||| ||| | |||||||| || | | || ||||| || || ||||| |||| Sbjct 61391 TCTCCATTCAAGTATTTGAAGGGGAGCGTGCTATGACCAAAGACAACAATAAACTAGGAA 61450 Query 476076 CTTTTAATCTTGAA-GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | ||| | ||||| || || || ||||| ||| ||||||||||||| || |||||| Sbjct 61451 CATTTGA-ATTGAACGGAATACCACCTGCACCCCGAGGAGTTCCTCAGATAGAAGTTGAA 61509 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 ||| | |||||||| |||||||| | ||||| ||||| Sbjct 61510 TTTAACATTGATGCTAATGGTATCATGAATGTATCTGCT 61548 >seq1378 Length=51351 Score = 181 bits (200), Expect = 7e-40 Identities = 464/690 (67%), Gaps = 21/690 (3%) Strand=Plus/Minus Query 475484 AGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGC--TACTCAAA 475541 ||||| || || || ||||| || ||||| ||| || | || || | || | || | Sbjct 47907 AGACGACTCAGGACAGCTTGCGAGCGTGCCAAGAGAACACTGTC--CAGCAGTTCTGAGG 47850 Query 475542 CTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGG 475601 | | |||| | || || || ||||| ||||| || | | | || ||| ||| Sbjct 47849 CCAACATTGAGATCGACTCGCTGTTTGAGGGAATGGACTTCTACAGCAAAATCACACGGG 47790 Query 475602 CTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAG 475661 ||| ||||||||| || ||| | ||| | || | ||| | ||||| || || ||| Sbjct 47789 CTAGATTTGAAGAAATGTGTGCAGATTTGTTCCGTGGAACCTTAGAACCTGTAGAGAAAG 47730 Query 475662 TTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTT 475721 || || || | ||| | |||||||| || | || || | ||| | || ||||| | Sbjct 47729 CCCTGAGGGACGCCAAAATGGACAAATCTAAAATTCACGAGGTGGTTTTGGTTGGAGGGT 47670 Query 475722 CAACAAGAATTCCAAAAATA-AGAGAAATGCTTTCATCATATTTTAATGGTA-AAAAGTT 475779 | |||||||||||||| || ||| ||||||| || | | || | || ||||| Sbjct 47669 CGACAAGAATTCCAAAGATCCAGA-AAATGCTG-CA--AGACTTCATGGGCGGAAAAG-- 47616 Query 475780 AAATGAA--AGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 || |||| ||| | || || || |||||||| || || || || ||||||||||| | Sbjct 47615 AACTGAACAAGTCGATCAACCCAGACGAAGCTGTGGCCTACGGTGCCGCTGTCCAAGCGG 47556 Query 475836 CTATTTTATCAGGTCAATCAGACGAGAAACTA--AATAATATTGTACTTGTTGACGTAAC 475893 ||||||| ||| || ||| | || | | || | || | || || || || || Sbjct 47555 CTATTTTGA-AGGGAGATAAGA-GTGATGCCATCAAGGACGTTCTTCTGGTCGATGTCAC 47498 Query 475894 TCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAA 475953 |||||| || ||||| ||||||| | ||||||| | ||||| || | | || |||| Sbjct 47497 TCCACTGTCTTTAGGCATTGAAACTGCTGGAGGGGTCATGACAAAGATCGTCGAACGAAA 47438 Query 475954 TACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAAC 476013 | | || || ||| |||| | || |||| || || ||||| || | Sbjct 47437 TGCCAAGATTCCTACTAAAGCATCACAGACCTTCACCACATACTCCGATAACCAGCCCGG 47378 Query 476014 TGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGG 476073 |||| |||| || | |||||||||||| || | || ||||| ||||||||| | || Sbjct 47377 TGTATCCATTCAGGTGTTTGAAGGTGAACGAGCCATGACAAAAGACAATAACAAATTAGG 47318 Query 476074 AACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTAC 476133 |||||| | || | || |||||||| || || |||| || || || ||||| || Sbjct 47317 TACTTTTGAACTGAATGGAATTCCTCCCGCCCCTCGAGGTGTCCCACAGATTGACGTGGA 47258 Query 476134 TTTTGATATTGATGCAAATGGTATTCTTAA 476163 ||||| ||||| || ||||||| |||||| Sbjct 47257 GTTTGACATTGACGCCAATGGTA-TCTTAA 47229 Score = 158 bits (174), Expect = 8e-33 Identities = 366/550 (67%), Gaps = 4/550 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || || | ||||| || | ||||| | ||| | ||| | || ||| Sbjct 48675 GCAATCGGCATCGACCTGGGAACGACGTTTTCCTGTGTCGGTGTATTTCAACAAGGAAAA 48616 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 |||||||| || ||||| |||||||| || ||||| || || || ||| | || || Sbjct 48615 GTAGAAATCATCGCCAACGACCAAGGAAACAGAACGACGCCCAGTTACGTTGCGTTCACA 48556 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || || || |||||||| |||||| | || | || || | ||| Sbjct 48555 GATACCGAGAGACTGATAGGAGATGCGGCTAAAAACCAGGTAGCCATGAACGCCAACAAT 48496 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || || ||||| ||||| || |||| || || || || | || || ||| || || Sbjct 48495 ACAATCTTTGACGCTAAGAGGCTGATAGGCCGCAAGTTCAACGACGACAGTGTACAGTCC 48436 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC- 474627 || ||| |||||||| || | |||||| |||| ||| || || || | |||||| Sbjct 48435 GACATGAAACATTGGCCGTTCACGGTGATCAATGATGGAGGAAAGCCCAAGCTAGAAGTG 48376 Query 474628 -AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | | || | | | |||| || |||| | || ||| |||| |||||||| | Sbjct 48375 GAGTTCAAGAACGAGAAA--AAGAGATTTACCCCAGAAGAAATCAGCTCAATGGTGCTGA 48318 Query 474687 CCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 |||||||||| | || || | || | |||||| || || ||||| | | Sbjct 48317 CCAAAATGAAGGAGACAGCAGAAGCCTACTTGGGACAAACTGTCCGAGACGCAGTCGTCA 48258 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 | ||||| || ||||| || | | || | | || |||||||| || ||| || | Sbjct 48257 CCGTTCCTGCCTATTTCAACAACGCCCAGAGAGAGGCCACTAAAGACGCCGGAGTGATAG 48198 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | ||||| |||||| | | || | || ||||| ||||| || || || |||||||||| Sbjct 48197 CCGGTCTCAATGTTCTCAGGATAGTAAACGAACCCACAGCTGCTGCTCTGGCTTATGGTC 48138 Query 474867 TTGATAAGAA 474876 | |||||||| Sbjct 48137 TAGATAAGAA 48128 >seq2829 Length=271443 Score = 170 bits (188), Expect = 1e-36 Identities = 534/809 (66%), Gaps = 25/809 (3%) Strand=Plus/Plus Query 475367 ACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGT 475424 || || || ||| | || | || ||||||||||| || |||||| | || |||| | Sbjct 40028 ACTGCAGGGGATACTCACTTGGGAGGTGAAGATTTCGACAATAGAATGGTCAATCACTTT 40087 Query 475425 GTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCATTAA 475484 ||| | || |||||| | || | || || |||||| | | || | | Sbjct 40088 GTGCAG--GAATTCAAGCGCAAGTACAACAAAGACATTTCAAAAAATAACCGTTCACTGA 40145 Query 475485 GACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGC--TACTCAAAC 475542 |||| || || || ||||| || ||||| ||| || | || || | || | || | | Sbjct 40146 GACGACTCAGGACGGCTTGCGAGCGTGCCAAGAGAACCCTGTC--CAGCAGTTCTGAGGC 40203 Query 475543 TACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGC 475602 | |||| | || || || ||||| ||||| || | | | || ||| | || Sbjct 40204 CAACATTGAGATCGACTCGCTGTTTGAGGGAATGGACTTCTACAGCAAAATCACACGAGC 40263 Query 475603 TAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGT 475662 || ||||||||| | ||| | ||| | || | ||| | ||||||||||| ||| Sbjct 40264 TAGATTTGAAGAACTGTGTGCAGATTTGTTCCGTGGAACCTTAGAACCCGTTGAGAAAGC 40323 Query 475663 TCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTC 475722 || | ||| | ||| | |||||||| || | || || | ||||| || ||||| || Sbjct 40324 CCTGCGGGATGCCAAAATGGACAAATCTAAAATTCACGAGGTGGTTCTGGTTGGAGGGTC 40383 Query 475723 AACAAGAATTCCAAAAATA-AGAGAAATGCTTTCATCATATTTTAATGGTA-AAAAGTTA 475780 ||| |||||||||| || ||| ||||||| || | | || | || ||||| | Sbjct 40384 GACACGAATTCCAAAGATCCAGA-AAATGCTG-CA--AGACTTCATGGGCGGAAAAG--A 40437 Query 475781 AATGAA--AGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGC 475836 | |||| | | || || || ||||| ||||| || ||||| || ||||||||||| || Sbjct 40438 ACTGAACAAATCTATCAACCCAGATGAGGCTGTAGCCTATGGTGCCGCTGTCCAAGCGGC 40497 Query 475837 TATTTTATCAGGTCAATCAGACGAGAAACTA--AATAATATTGTACTTGTTGACGTAACT 475894 |||| | ||| || ||| | || | | || | || | || || || || ||| Sbjct 40498 TATTCTGA-AGGGAGATAAGA-GTGATGCCATCAAGGACGTTCTCCTGGTCGATGTCACT 40555 Query 475895 CCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAAT 475954 ||| | || |||| ||||||| | ||||||| | ||||| || | | || ||||| Sbjct 40556 CCATTGTCTCTAGGCATTGAAACTGCTGGAGGGGTCATGACAAAGATCGTCGAACGAAAT 40615 Query 475955 ACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | || || ||| |||| | || |||| || || ||||| || | | Sbjct 40616 GCCAAGATTCCTACCAAGGCATCACAGACCTTCACCACATACTCCGATAACCAGCCTGGT 40675 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 ||| |||| || | |||||||||||| || | || ||||| ||||||||| | || Sbjct 40676 GTATCCATTCAGGTGTTTGAAGGTGAACGAGCCATGACAAAAGACAATAACAAATTAGGT 40735 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 || ||| | || | || |||||||| || || |||| || || || ||||| || Sbjct 40736 ACATTTGAACTGAATGGAATTCCTCCCGCCCCTCGAGGTGTCCCACAGATTGATGTGGAG 40795 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAA 476163 ||||| ||||| || ||||||| |||||| Sbjct 40796 TTTGACATTGACGCCAATGGTA-TCTTAA 40823 Score = 167 bits (184), Expect = 2e-35 Identities = 531/807 (66%), Gaps = 21/807 (3%) Strand=Plus/Minus Query 475367 ACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGT 475424 || || || ||| | || | || ||||||||||| || |||||| | || |||| | Sbjct 36863 ACTGCAGGGGATACTCACTTGGGAGGTGAAGATTTCGACAATAGAATGGTCAATCACTTT 36804 Query 475425 GTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCATTAA 475484 ||| | || |||||| | || | || || |||||| | | || | | Sbjct 36803 GTGCAG--GAATTCAAGCGCAAGTACAACAAAGACATTTCAAAAAATAACCGTTCACTGA 36746 Query 475485 GACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGC--TACTCAAAC 475542 |||| || || || ||||| || ||||| ||| || | || || | || | || | | Sbjct 36745 GACGACTCAGGACGGCTTGCGAGCGTGCCAAGAGAACCCTGTC--CAGCAGTTCTGAGGC 36688 Query 475543 TACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGC 475602 | |||| | || || || ||||| ||||| || | | | || ||| | || Sbjct 36687 CAACATTGAGATCGACTCGCTGTTTGAGGGAATGGACTTCTACAGCAAAATCACACGAGC 36628 Query 475603 TAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGT 475662 || ||||||||| | ||| | ||| | || | ||| | |||||||| || ||| Sbjct 36627 TAGATTTGAAGAACTGTGTGCAGATTTGTTCCGTGGAACCTTAGAACCCGTCGAGAAAGC 36568 Query 475663 TCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTC 475722 || | ||| | ||| | |||||||| || | || || | ||||| || ||||| || Sbjct 36567 CCTGCGGGATGCCAAAATGGACAAATCTAAAATTCACGAGGTGGTTCTGGTTGGAGGGTC 36508 Query 475723 AACAAGAATTCCAAAAATA-AGAGAAATGCTTTCATCATATTTTAATGGTA-AAAAGT-- 475778 ||| |||||||||| || ||| ||||||| || | | || | || ||||| Sbjct 36507 GACACGAATTCCAAAGATCCAGA-AAATGCTC-CA--AGACTTCATGGGCGGAAAAGAAC 36452 Query 475779 TAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTA 475838 | ||| || | | || || ||||| ||||| || ||||| || ||||||||||| |||| Sbjct 36451 TGAATAAATCTATCAACCCAGATGAGGCTGTAGCCTATGGTGCCGCTGTCCAAGCGGCTA 36392 Query 475839 TTTTATCAGGTCAATCAGACGAGAAACTA--AATAATATTGTACTTGTTGACGTAACTCC 475896 || | ||| || ||| | || | | || | || | || || || || ||||| Sbjct 36391 TTCTGA-AGGGAGATAAGA-GTGATGCCATCAAGGACGTTCTCCTGGTCGATGTCACTCC 36334 Query 475897 ACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATAC 475956 | | || |||| ||||||| | ||||||| | ||||| || | | || ||||| | Sbjct 36333 ATTGTCTCTAGGCATTGAAACTGCTGGAGGGGTCATGACAAAGATCGTCGAACGAAATGC 36274 Query 475957 TCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGT 476016 || || ||| |||| | || |||| || || ||||| || | ||| Sbjct 36273 CAAGATTCCTACCAAGGCATCACAGACCTTCACCACATACTCCGATAACCAGCCTGGTGT 36214 Query 476017 AACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAAC 476076 | |||| || | |||||||||||| || | || ||||| ||||||||| | || || Sbjct 36213 ATCCATTCAGGTGTTTGAAGGTGAACGAGCCATGACAAAAGACAATAACAAATTAGGTAC 36154 Query 476077 TTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTT 476136 |||| | || | || |||||||| || || |||| || || || ||||| || || Sbjct 36153 TTTTGAACTGAATGGAATTCCTCCCGCCCCTCGAGGTGTCCCACAGATTGACGTGGAGTT 36094 Query 476137 TGATATTGATGCAAATGGTATTCTTAA 476163 ||| ||||| || || |||| |||||| Sbjct 36093 TGACATTGACGCCAACGGTA-TCTTAA 36068 >seq3501 Length=57033 Score = 163 bits (180), Expect = 2e-34 Identities = 365/546 (67%), Gaps = 4/546 (1%) Strand=Plus/Minus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| ||||||||||| || | | ||||||| |||| | ||||| ||||| | Sbjct 29285 TTGGCATTGATTTAGGGACATCATTTTCGTGTGTAGGGGTTTTCCGGAATGGAAAAGTGG 29226 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 | || ||||| ||||||||||| || ||||| || ||| ||||| ||||||| | | Sbjct 29225 ATATTATTGCTAATGACCAAGGCAACAGAACCACTCCAAGTTATGTCGCTTTTACACATA 29166 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | | | ||| ||||| |||| |||||| |||| | || | | ||||| Sbjct 29165 CCGGCCGTCTGATTGGCGATGGAGCTAAAAGCCAAGTAACTATGAACGCCGGGAATACGG 29106 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | ||||||| |||||| | || || || | ||| ||| | || | | | | Sbjct 29105 TATTTGATGTCAAAAGACTAATCGGACGCAGGTTTACTGACGAAAGCGTGCTTGCAAACA 29046 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CAAT 474630 || |||||||| ||||| || | | | || |||||||| | |||||| ||| Sbjct 29045 TGAAACATTGGCCGTTTAAAGTCGTCGACGATGAAGGTAAACCGAAAGTAGAAGTTGAAT 28986 Query 474631 ACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAA 474690 ||| ||| |||| || ||| |||| ||| |||| ||||||||| | | || Sbjct 28985 ACA--AAGGGGAAATTACGAGATTCACACCAGAAGAAATCAGTTCAATGGTGCTTGTTAA 28928 Query 474691 AATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGT 474750 |||||| |||| || ||| ||| ||| || || || || || || || || Sbjct 28927 AATGAAGAAAACAGCTGAAACATTTCTAGGAGAACGCGTTCAAGAGGCCGTCATAACCGT 28868 Query 474751 TCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGG 474810 ||||| || || ||| || ||||| | |||| || |||||||| |||| ||||| || Sbjct 28867 GCCAGCCTACTTCAATAATGCTCAAAGGGAAGCCACCAAAGATGCTGGAACTATTGCTGG 28808 Query 474811 TCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGA 474870 ||| |||| | || || || ||||| |||||||| || || | || | ||| || || Sbjct 28807 TCTGCATGTGCTCCGAATCATAAATGAGCCAACAGCTGCAGCTTTAGCCTTTGGCCTAGA 28748 Query 474871 TAAGAA 474876 ||||| Sbjct 28747 GAAGAA 28742 >seq1971 Length=431542 Score = 147 bits (162), Expect = 1e-29 Identities = 319/469 (68%), Gaps = 9/469 (2%) Strand=Plus/Minus Query 474378 AAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATG 474437 ||||||| ||||||||| ||||||||||||||||| || | | || ||||| |||| Sbjct 11078 AAAATGGACGAGTAGAAATCATTGCCAATGACCAAGGAAACCGTATCACCCCATCCTATG 11019 Query 474438 TTTCTTTTACTGAA---ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTG-CA 474493 || | || || | | | ||||| | |||||||||||||||||| |||| |||| | Sbjct 11018 TTGCCTTCACAGCAGACAATGAACGATTGATTGGAGATGCTGCTAAAAATCA-GCTGACC 10960 Query 474494 TCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGAT 474553 || || |||| || || |||||||||| ||| | ||||||||||| | | ||||| Sbjct 10959 TCCAACCCTGAAAACACCATTTTTGATGTCAAACGTTTGATTGGTCGCACCTGGGATGAC 10900 Query 474554 ACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAA 474613 | |||| || || || | | | ||||| || || || || ||| ||| Sbjct 10899 AAGTCTGTTCAGAAGGACATTCAGTACTATCCTTTCAAAGTCATCAACAAGAATGGAAAA 10840 Query 474614 CCATATAT-AGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTC 474672 ||| | || || | | | | ||||| ||| ||| | || ||| || |||| Sbjct 10839 CCACACATCAGTGTCGAGGC-CAACGGTGAGGAGAAAGTCTTTGCTCCTGAAGAAGTTTC 10781 Query 474673 TTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAG-TAA 474731 | | |||||| | | || |||| ||| || || |||||| ||| ||| | | Sbjct 10780 TGCCATGGTTCTTGGAAAGATGAGGGAAATTGCTGAAGGAT-TCTTGGGCAAAAAGATCA 10722 Query 474732 CTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAG 474791 |||| ||||| ||||| || || || || |||||| | || ||||| || || || | Sbjct 10721 ACAATGCTGTAATCACTGTCCCTGCTTACTTCAATGATGCCCAGCGTCAGGCCACAAAGG 10662 Query 474792 ATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840 | || |||| ||||| ||||| ||||| | | ||||| ||||| || Sbjct 10661 ACGCTGGAACCATTGCTGGTCTCAATGTCATGAGAATTATCAATGAGCC 10613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267850668328532