Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq2585 87.8 6e-14 seq2422 87.8 6e-14 seq2083 87.8 6e-14 seq1512 87.8 6e-14 seq804 87.8 6e-14 seq308 87.8 6e-14 >seq2585 Length=802164 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 385228 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 385285 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 390505 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 390562 >seq2422 Length=719630 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 253415 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 253472 >seq2083 Length=207027 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 47166 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 47109 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 62854 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 62797 >seq1512 Length=462759 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 387521 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 387578 >seq804 Length=896878 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 620260 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 620203 >seq308 Length=402763 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 380798 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 380855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848272274055