Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1521 86.0 2e-11 >seq1521 Length=375746 Score = 86.0 bits (94), Expect = 2e-11 Identities = 100/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 ||| || |||| || ||||||| || || || | || || || || |||||| || | Sbjct 339723 GAGAGAGTAGTGGCCTTTGCTGCAGTGGAGGGTATCTTCTTCAGTGGAAGCTTT-GCTGC 339781 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 |||||||||| |||| ||||| ||| | |||| || || ||||| ||||| || ||||| Sbjct 339782 CATCTTCTGGCTGAAGAAGCGAGGAATCATGCCAGGGCTTACCTTCAGTAATGAGCTGAT 339841 Query 443826 CAGTCGGGACGAGG 443839 ||| | || |||| Sbjct 339842 TAGTAGAGATGAGG 339855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588180135099255