Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2869 98.7 1e-15 >seq2869 Length=866877 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 79324 AGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCC 79383 || || |||||||| || ||| ||||||| ||| ||||| | |||||| ||| ||| | Sbjct 630575 AGCCCTGGGCACTCATGAGGGTCCATCAGGGTCCACTCCTCATTCTTCTCGACCCTCTTC 630634 Query 79384 ATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCG 79443 || |||||||| |||||||||| ||| ||| || || || | | |||||| | | Sbjct 630635 ATAAAGAGGTCAGGGATCCACATGGCGTAGAACAGATCCCGAGCTCTCTGCTCCTCCTTG 630694 Query 79444 CCCTGGTTCAGACG-CAGCTCGAGAAAGTCCATGAT---GTCGGCGTGCCACGGCTCCAG 79499 || |||| ||| |||||||| ||||| ||| || |||||||||||||| Sbjct 630695 CCAGTGTTCTTCTTACAG-TCGAGAAA---CATGAAAACGTCTGCATGCCACGGCTCCAG 630750 Query 79500 ATAGATGGCGAACGAACC 79517 || ||||| |||| ||| Sbjct 630751 GTAAATGGCAAACGCACC 630768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548472285606960