Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1521 91.5 1e-13 >seq1521 Length=375746 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 ||||||| || || || || || |||| ||| |||||||| || || || ||||| ||| Sbjct 339334 GGGTCTTTGATGTAGGTATCAATGAGTAAGCTGTACATTTCGGAGTGGATGTTTTCCATA 339275 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 |||||||| ||||| || || |||| || ||||| | || ||||| |||| ||||| Sbjct 339274 GCAATCTGGAATCCATAGAAACATCGGGCCTCTGTAGCCTGTACTTCTTTACTGAATCTC 339215 Query 4929 TCTAC 4933 || || Sbjct 339214 TCCAC 339210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427009737455447