Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq144 95.1 2e-14 >seq144 Length=4367352 Score = 95.1 bits (104), Expect = 2e-14 Identities = 122/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 135747 GACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTCATTTTCTG-TCCTGCAATGA 135805 ||| | ||| || ||||| ||||| |||||||| || || || || ||| || |||| Sbjct 2126101 GACCTGTATAGTGAGAGCTTGGGACCTGAACAAACC-CTTATATTTTGCTCCAGCTATGA 2126043 Query 135806 ATACTCTTATGTGGGAACATCCTATTACAGAAAAACATATAGATACGTTAAAATATATGG 135865 | || | |||||| | ||||| ||||||| | |||| ||| | | | | ||| | | | Sbjct 2126042 ACACCTTCATGTGGCAGCATCCAATTACAGCACAACAAATAAACATGCTGAAAAACTTTG 2125983 Query 135866 GTTTCATAGAAATAGAATGCATAGaaaaaaaaCTAGCATGTGGAGA 135911 | | | |||||| | ||||| || |||||||||||||||||||| Sbjct 2125982 GATATAAAGAAATCCACTGCATTGAGAAAAAACTAGCATGTGGAGA 2125937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923192668694320