Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq40 86.0 7e-12 >seq40 Length=2822076 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/79 (86%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 92781 ATTCTTATTCATAACACCACATTTT-TGGTATTCCCCAACttttttttCAAAGAAATTTG 92839 |||| ||||||||| || |||||| |||||||| || || ||||||||||||||||| Sbjct 2221596 ATTCCCATTCATAACCCC-CATTTTCTGGTATTCTCCTACACGTTTTTCAAAGAAATTTG 2221654 Query 92840 TCTTTCCTTCCAAAGATAT 92858 ||||||| ||||||||||| Sbjct 2221655 TCTTTCCCTCCAAAGATAT 2221673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858308047920