Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq31 280 1e-69 seq250 262 3e-64 seq63 138 9e-27 seq1 104 2e-16 >seq31 Length=12680670 Score = 280 bits (310), Expect = 1e-69 Identities = 1065/1645 (65%), Gaps = 55/1645 (3%) Strand=Plus/Plus Query 517094 TAATTTTCTAATTCATTTTTAGAATCAACAGCAG-CTTTTTTCTTGTTATCTGCTTCTTC 517152 |||||||| | || |||||| || | || ||| | |||| || | ||| |||||| Sbjct 10244448 TAATTTTCCAGTTGATTTTTGGACTGTAC-GCATTCCCTTTTGTTCTCATCCTCTTCTTG 10244506 Query 517153 AAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT 517212 | ||| || |||||| || ||||| ||||||| | ||| || || ||| | Sbjct 10244507 ATATTTTTCGGCTTCTGAAACCATTCGATCAATTTCAGCTTTGCTGAGTCGTCCTTTGTC 10244566 Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272 ||| ||||| || | || || ||| | || || || | |||| ||||| | Sbjct 10244567 ATTCGTAATGGTTACTTTATTTGATCTTCCAGTGCTCTTGTCGACAGCAGAAACATTCAA 10244626 Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 517332 ||| | || ||||| | ||||||| || ||||| || || || ||||| | || || Sbjct 10244627 AATGCAGTTCGCATCTAGATCAAATTCCACATCAATCTGCGGAACACCTCTTGGTGCTGG 10244686 Query 517333 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 517392 ||| || || | || ||| |||| || |||| || || || | ||||| Sbjct 10244687 TGGAATACCCGTTAGATCAAAGTTTCCGAGTTTATGGTTGTCACGGGTCATGGCGCGTTC 10244746 Query 517393 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 517452 || ||||| | || || || | | ||| | || || || ||||| ||| ||| Sbjct 10244747 TCCTTCGAACACCTGTATGTGTACACCTGGCTGACTGTCCGAGTACGTTGTGAATG-TCT 10244805 Query 517453 GGATT-TTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTG 517511 | | |||| |||||||| | || || ||||| | || ||||| | || |||| Sbjct 10244806 TGCTGGTTTTGCAAGGAATGCGACTATTCCTGTCAATTAGGTTTGTCATTACGCCGCCTG 10244865 Query 517512 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTTTT 517570 ||||||||| ||||| || | |||| || |||| ||||| | | ||| ||| Sbjct 10244866 CTGTTTCTATCCCAAGGGATAAGGGAGCAACGTCAATTAGGAGTACGTCTTTTAAG---- 10244921 Query 517571 TCATCAGT----TTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 517626 ||||| | | || |||| || || || |||||||| |||||||| ||||| || Sbjct 10244922 GCATCACTGGAATCCCCCGACAA-AACGGCAGCCTGAATAGCGGCACCATACGCAACCGC 10244980 Query 517627 TTCATCAGG----ATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 517682 ||| || || ||| || | |||| || ||| |||| |||| | |||| Sbjct 10244981 TTCGTCTGGATTTATTGACCGATTCAATTCCTTTCCGCCCAT----GAAATCAGTGAGAA 10245036 Query 517683 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 517742 ||| | | ||| || || || | || || || ||||| ||||| ||||| | | | Sbjct 10245037 GTTTTTGGATCTTTGGTATTCGTGTAGAACCACCCACTAAAACAATATCATGGATTTTGG 10245096 Query 517743 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACA 517802 |||| || | |||| |||| ||| || || |||||||| | | | || | Sbjct 10245097 ATTTTTCTAACTTTGCATCCTTTAACGCTCGCTCCACGGGTTCCATGGTGCTTTTGAAAA 10245156 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 517862 ||| |||||||||||||||||| || | ||||| || | ||||||| || | Sbjct 10245157 GGTCGGAACAAAGTTCTTCGAATCGCGCGCGAGTAATTTTGGTGTAGAAATCAATGCCCT 10245216 Query 517863 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 517922 || | || |||| ||| || | | | || | ||||| | | || || | Sbjct 10245217 CGGTTAGCGAGTCAATTTCTATGCTTGCCTCCGTGCTACTTGATAGAGTCCTCTTGGCTC 10245276 Query 517923 GTTCACATGCTGTCCTTAGTCTTC-GTAAG-GCTTTTGCTGATTGATTCAAATCTGTTTT 517980 ||||||| || |||| || |||| | || || || | ||| | | |||| | | Sbjct 10245277 GTTCACACGCCGTCCGTAACCTTCTGAGAGCTCTATTATTTTTTG--TAATATCTCTCTG 10245334 Query 517981 ATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCA 518038 | ||| | |||||| |||| ||| | || | || | | || || ||||| || Sbjct 10245335 GTGTTTACGCTTGAATTCTTTGACAAA--GTGGTCAACCATCCTGTTGTCGAAATCCTCT 10245392 Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAGA 518095 ||||||| | |||| || | |||| ||||| ||||| || || |||| Sbjct 10245393 CCTCCCAGGTGTGTATCCCCCGCTGTAGACTGTACTTCGAAAACCGAGCCTTCATCAATC 10245452 Query 518096 GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC- 518154 | | || | ||||| || ||||| || | ||| |||| | |||||| | || Sbjct 10245453 GTAAGAATCGAAACATCGAAAGTACCACCTCCTAAATCGTAAATCAAAACATTCTTCTCG 10245512 Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 || | ||||| || | ||| || || | ||| || || || |||||||||| ||| Sbjct 10245513 CCTGAC-AAATTTTTGTCTAAACCGTAGGCTAGAGCTGCCGCCGTAGGTTCATTAACAAT 10245571 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 ||| || |||| | || ||||| ||||| ||||| || || |||| ||| ||||| Sbjct 10245572 TCTTAAGACATCTAACCCTGCAATGACGCCTGCGTCTTTCGTCGCCTGTCGTTGAGAATC 10245631 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA-CCAATATAAGCGC 518333 || ||||| || || || |||||||| || | | | ||||| || || || || Sbjct 10245632 ATTGAAATACGCTGGTACTGTAATAACCGCCT---GTCCGACTTTATCCCCTAGAAAGGC 10245688 Query 518334 TT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--GGAATAT 518389 | ||||| | |||||||| | || | |||||| |||| |||||| ||| | Sbjct 10245689 CTCCGCCGTCTCCTTCATTTTCGTCAACACCATTGAGCTGATTTCTTCTGGACTGAAAGT 10245748 Query 518390 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AATA 518446 | || | ||||| | |||| |||| || ||| || || || || Sbjct 10245749 T--TTCAACTCATTCTTATATTCCACTTGAACCATCGGT---TTTCCTTGTTTGTCTATC 10245803 Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTAC 518504 || ||||||| ||||| |||||||| ||| |||| | || | || | ||| | Sbjct 10245804 ACCTTAAATGACCAGTGCTTCATATCGCTTTG--CACTGAAGACTCGTCGAATTTTCTTC 10245861 Query 518505 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGG 518564 |||| | || || | ||||| | || || | || || || || |||| | ||||| Sbjct 10245862 CAATGAGTCTCTTCACGTCAAACACTGTGTTCTTGGGGTTCATCGCCACTTGGTTTTTGG 10245921 Query 518565 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624 ||||||||||||||| |||| || |||||||| | || || ||| ||||| |||| Sbjct 10245922 CTGCATCTCCAATCATGCGTTCGGTTTCTGTAAAAGCGACGTAACTTGGCGTTGTTCGAT 10245981 Query 518625 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 518684 | ||||| ||||| ||||| || || ||||| |||| || | || || || ||| Sbjct 10245982 TGCCTTGGTCATTAGCAATGATCTCCACTTTTCCATGCTGGAAAACCCCCACGCAAGAGT 10246041 Query 518685 AAGTTGTTCCTAAATCAATACCAAT 518709 |||||||||| | |||||| ||||| Sbjct 10246042 AAGTTGTTCCGAGATCAATTCCAAT 10246066 >seq250 Length=662674 Score = 262 bits (290), Expect = 3e-64 Identities = 979/1520 (64%), Gaps = 35/1520 (2%) Strand=Plus/Minus Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272 ||| || || || || || ||||||||| || || || |||| ||||| | Sbjct 542920 ATTGGTTATTGTGATTTTGTTGGATTTGCCAGTACTCTTGTCCATTGCAGAAACATTCAT 542861 Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 517332 || |||||||| || | | ||| || ||||| || || || || || | ||||| Sbjct 542860 GATGCCATTGGCGTCAATGTTAAACTCCACCTCAATCTGTGGAACGCCCCTGGGTGCAGG 542801 Query 517333 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 517392 || ||||| | ||| | ||| || ||||| ||||| || ||||| || | | ||| Sbjct 542800 GGGTATCCCATTCAATTCAAAGGTACCCAGTTTATTGTTGTCTTTGGTCATGGCCCTTTC 542741 Query 517393 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 517452 || || || | |||||| | |||| | | || ||||||| ||| || || |||| | Sbjct 542740 TCCTTCAAACACTTGGATGGAAACTCCTGGCTGGTTATCTGCATAGGTGGTGAATATTTG 542681 Query 517453 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 ||| ||| || ||| | ||||| | || || | |||||||||| || || || Sbjct 542680 GGACGCTTTGGTTGGTATTTTGGTGTTGCGCTCTATTAACTTGGTCATAACGCCTCCAGC 542621 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTTTTT 517571 ||||| | ||| || || | || || |||||||| || | || || ||||| || Sbjct 542620 GGTTTCAATACCGAGGGATAATGGTGTTACATCAACAAGCAGAACATCTTTGA----TTA 542565 Query 517572 CATCA-GTTTGACCAA---CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 517627 | || ||| | || ||||| | || || |||| ||||| ||||| ||||||||| Sbjct 542564 CGTCGTGTTGGTCCCCTGTCAAGA-TGGCCGCCTGAACCGCAGCTCCATAAGCAACAGCT 542506 Query 517628 TCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGT 517687 || || ||||||| | || ||| || | || ||| | |||| | || || | | Sbjct 542505 TCGTCTGGATTAATGGATTTATTCAGCTCCTTTCCAGCCATGAAATCTTGCAGTAGCTTT 542446 Query 517688 CTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 517747 || || ||||| |||| ||||||||| || | || | ||||| ||| | |||||| Sbjct 542445 TGAACTTTTGGAATTCGAGTTGATCCTCCTACAAGGACTACTTCATTCACTTTAGATTTA 542386 Query 517748 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCT 517807 |||| ||| | ||| ||| | || ||||| ||||| || || || || || Sbjct 542385 TCCAATTTGGCATCTCGCAAAGCCTTCTCAACCGGTTCCAGGGTGCTTCGGAATAAATCA 542326 Query 517808 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAA 517866 | ||| | || || ||| ||| || | || | || || || || || || || || Sbjct 542325 GCACACAACTCCTCAAATCGAGCCCT-GGAAATTTTACTGTAAAAGTCTATGCCCTCAAA 542267 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 | |||||||||||||| | | | || || |||| | ||| ||||| || Sbjct 542266 AAGTGAATCAACTTCAATATTGGCCTCAGAGCTGTTCGACAGTGTTCTTTTTGCACGCTC 542207 Query 517927 ACATGCTGTCCTTAGTCTTCGTAAG--GCTTTTGCTGATTGATTCAAATCTGTTTTATAT 517984 ||| || | || |||| || | | || | | | | ||| | |||| | || || Sbjct 542206 ACACGCAGATCTAAGTCGTCTCAGGGAGCGCTGGTTTTTAGAT--ATATCTTTGTTGTAC 542149 Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTC 518042 || | ||||| |||| |||| || | || | | || ||||| || ||||||| Sbjct 542148 TTGCGTTTGAATTCTT--GCACAAAGTGGTCCACCATCCTATGGTCAAAGTCCTCACCTC 542091 Query 518043 CCAATTTAGTATTTCC------TGAC-GTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 518095 | || | |||| ||| |||| | | ||| | | ||| || || || | Sbjct 542090 CTAAATGTGTATCTCCAGCAGTTGACAGAACCTCAAATATTGAA----CCCTCATCGATT 542035 Query 518096 GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 518155 || | | ||||| || || || || | ||||| ||||| ||||| ||||| Sbjct 542034 CTCAGGATTGAAACATCGAATGTGCCCCCTCCTAAGTCAAAGATAAGAACATT--TTTCT 541977 Query 518156 TTGTCTT--GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 518213 ||| |||||| ||||| ||||| || | || || || || |||||||| || | Sbjct 541976 CACCCTTAATGTTTTTGTCAAGTCCATAGGCTAGTGCTGCCGCGGTAGGTTCATTGATGA 541917 Query 518214 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT 518273 | | | || || || || || || | || || || || || || | ||| ||||||| Sbjct 541916 TCCGTAGGACCTTCAGTCCCGCTATGATGCCGGCGTCCTTGGTCGCCTCTCTCTGTGAAT 541857 Query 518274 CGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGC 518333 ||| ||||| || || || || || || || || || || | ||| ||||| || Sbjct 541856 TGTTGAAATAGGCGGGGACCGTGATGACAGCTTCGGTGACCGTCTGACCCATATAGGCCT 541797 Query 518334 TTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCT 518393 || | | ||||| || | || | ||| || || | || || | | || Sbjct 541796 CGGCTATCTCCTTCATCTTGGTCAAGACCATGGAGCTGATCTCCTCCGGTGTGAACCTCT 541737 Query 518394 TGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAA 518453 | || | || || || | ||||| ||| | || | || || | Sbjct 541736 TCACCTCTCCCTTGTACTCCACCTCTAGCCTGGGTTTCCCGCCATCGTTCACCACCTTGA 541677 Query 518454 ATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATC 518513 ||||||||| ||||||||| || || || || | ||| |||| | | || ||||||| Sbjct 541676 ATGGCCAGTGTTTCATATCCGACTGCACGCTATCATCACTAAACTTGCGTCCGATTAATC 541617 Query 518514 GTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTC 518573 |||| ||||| || |||||||| ||| ||| | || | || | |||||| | ||| | Sbjct 541616 GTTTGGCATCGAATATAGTATTACTTGCATTTAAGGCCACCTGGTTTTTGGCCGAATCGC 541557 Query 518574 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 518633 | ||||| ||||| || ||||| | ||||| ||| || || || || || || | Sbjct 541556 CGATCAGTCTCTCTGTGTCCGTAAAAGCGACATAGCTTGGCGTGGTCCGGTTCCCCTGGT 541497 Query 518634 CATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTC 518693 |||| || || || || ||||| || | || | || || ||||| ||| || || | Sbjct 541496 CATTGGCGATGATCTCGACTTTTCCGTGCTGGAAAACGCCGACACAGGAAAATGTGGTCC 541437 Query 518694 CTAAATCAATACCAATAGCA 518713 | |||||||| ||||| ||| Sbjct 541436 CCAAATCAATTCCAATTGCA 541417 Score = 152 bits (168), Expect = 4e-31 Identities = 927/1470 (63%), Gaps = 29/1470 (2%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||||||||||| | ||||||||| ||||| | ||||| | || ||||| || || || Sbjct 551885 GCAGTCACATTTACAATACCATTTGCATCAATGTCAAAGTTAACCTCAATCTGTGGCACA 551944 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | ||| || || || || | || | |||||| || | || | || |||||| Sbjct 551945 CCACAGAGAGAAGCAGGAATTCCATTCAGTTCAAATGTACCTACTATACTGTTGTCTTTA 552004 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | | || || | || | | | || ||| | | ||||| | || | || Sbjct 552005 GTCATGGCCCACTCTCCAGCAAACACGCGCACGGTGACTCCTGGCTGATTGT-TGTAGAA 552063 Query 517439 -GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 ||||| ||| | ||| | ||||||| | ||||| | ||||| | || Sbjct 552064 TGTTGTGAATGTCTTTGATGCTGCTGCAGGAATTTTGGTGTTGCAGTCAATTACTTTATC 552123 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTA---GGAC 517554 ||||| ||||| || || || | || || |||| ||| || ||||| || | |||| Sbjct 552124 CATAAACCCACCCGCAGTCTCGATGCCCAGGGAAAAAGGGGTAACATCCACCAACAGGAC 552183 Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614 | | |||| || | || ||| || ||| || || ||||| | |||||||| Sbjct 552184 A-TCTTTTACCATTCCACTTC--TTTCTCCTTTAAGTATGGCAGCTTGCACGGCAGCACC 552240 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT 517674 ||| || || || |||||| || | | || | |||||| | ||| | Sbjct 552241 ATAAGCCACTGCCTCATCAATGTTCATTGACCTGTTCAACACTTTACCTCCCATAAAGTC 552300 Query 517675 -TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 517733 || || | |||| | || ||||| | ||||||||| || || | ||| |||| Sbjct 552301 CTGCAACAT-TTGTTGAATTTTTGGAATCCTGCTTGATCCTCCCACCAACAAAATCTCAT 552359 Query 517734 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGT-TCAAGACCC 517792 | | || ||| || | || || |||||| ||| ||||| || ||| | ||| Sbjct 552360 GAATTTGAGATGGTTCTAATTCTGCATCCAACAAAGCTTTTCTCACTGGTATTAAGG--- 552416 Query 517793 GCTCT----AAACAAGTCTGAACAAAGT-TCTTCGAATTTAGCTCTAGTAAGAGTGACAT 517847 ||| |||||||| ||| ||| ||| || ||| | | || || || || Sbjct 552417 --TCTTAAAAAACAAGTTGCTACAGAGTGTCTCAAAAGTTA-CACGAGAAATCTTGCTAT 552473 Query 517848 TATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATA 517907 | | |||||||| ||| | | | ||| | ||||| | |||| | | || | Sbjct 552474 AAAAGTCAATTCCCTCGTAAAGTGCATCCAATTCAAGACTGGTTTCGGAACTACTGGAAA 552533 Query 517908 GTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT 517967 | | || || | ||| ||||||| | | || | || | || | ||||| || | Sbjct 552534 GAATTCTCTTGGCCCTTTCGCATGCTGCCTTAAGACGTC-TGAGAGATCTGCTGTTTCCT 552592 Query 517968 -TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTA 518026 | |||| | || |||||||| || || || |||||| | || | |||| Sbjct 552593 CTTAAATTTTTTCCATATTTTCGTTTAAATTCCTCAACAAAGTGGACAACCATCAAATTA 552652 Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT--- 518083 ||||| ||||||||||||||| || | || | || | | |||| || | Sbjct 552653 TCAAAGTCTTCACCTCCCAATAATGTGTCCCCAGCAGTGGATAGCACTTCAAACACAGAA 552712 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 ||| | |||| | | | ||||| | || || ||||| | |||||| | | Sbjct 552713 CCACCATCAACTATAACCACTGACACATCGAGTGTCCCCCCACCTAAATCAAACACCATA 552772 Query 518144 ACATTCATTTCTTT-GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 518202 ||||| | ||| | |||| ||| || || ||| |||| | || |||||||| || Sbjct 552773 ACATTTCTCTCTCCAGAGATGGTCTTT-TCTAGTCCAAACGCCAGTGCTGCAGCAGTGGG 552831 Query 518203 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 518262 ||||| | |||| || ||||| ||||||||||| | || || || ||||| | Sbjct 552832 CTCATTGACGATTCGCAGAACATGTAGACCAGCAATCAAGGCAGCGTCCTTGGTGGCCTC 552891 Query 518263 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACC 518322 || || | || ||| || || || || || || ||||| || || || || || Sbjct 552892 CCTCTGGGCATTGTTGAAGTACGCTGGCACGGTGATAACAGCGTCTGTGACAGGCACTCC 552951 Query 518323 AATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 || ||| || || || | |||||||||| | || ||| || |||| ||| || Sbjct 552952 AAGATAGGCCTCGGCAGTCTTTTTCATTTTAACCAGAACCATGGAACTTATTTCTTCAGG 553011 Query 518383 GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT 518442 | | || ||| ||| || ||| ||||| | | |||||||| |||||| Sbjct 553012 TGTAAATCTCTTCATTTCTCCTTTGTATTCAACTTCTACTTTCGGTTTATTTTCAACATC 553071 Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 518502 || ||||| || ||||| | ||| | | | || |||| ||||| | | Sbjct 553072 AACGACTTTGAACGGCCAATGTTTACTGTTTACAATCACGCTTTCATCATTGTACATGCG 553131 Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 || |||| || ||| || ||||| | ||||| | || || | | | || ||| Sbjct 553132 TCCTATTAGTCTTTTAGCGTCAAACACCGTATTTACAGCGTTCATAGTAACCTGGCTTTT 553191 Query 518563 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 518622 ||| |||| ||||| || | | || ||| || | || || || ||||| | Sbjct 553192 AGCTCCATCGCCAATAAGTCGACCGGTGCTTGTGAAGGCCACGTAACTAGGGGTTGTCCT 553251 Query 518623 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 518682 ||||||||| ||||| |||||||| |||||||| |||||||| | || || |||||| Sbjct 553252 ATTACCTTGGTCATTTGCAATAATGTCAACTTTGCCATTTTGATAAACTCCAACACAAGA 553311 Query 518683 AAAAGTTGTTCCTAAATCAATACCAATAGC 518712 ||||| |||||| ||||| || || | ||| Sbjct 553312 AAAAGATGTTCCCAAATCTATTCCGACAGC 553341 >seq63 Length=7786243 Score = 138 bits (152), Expect = 9e-27 Identities = 332/493 (67%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 ||||| ||||||||||||| ||||| |||||||||||| | || ||||| |||||||| Sbjct 5400003 GGTTCGTTAATAATTCTCATGACATTGAGACCAGCAATTGTACCAGCATCCTTAGTGGCC 5400062 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA--CTTCTT 518318 || | || | ||| ||||| || ||||| |||||||| || |||| |||| ||| || Sbjct 5400063 TGACGCTGGGCATCATTAAAGTAAGCAGGGACAGTAATGACAGCAT-TGTTAATCTTTTT 5400121 Query 518319 TACCAA-TATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375 |||| ||| ||| || | | ||||||| | || | ||| | ||| | || Sbjct 5400122 GCCCAAGTAT----CCTTCAGCAATCTCCCTCATTTTCCCTAGGACCATGGCTGACACTT 5400177 Query 518376 GTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATA-CTTCA-----AAATATGGTT 518429 |||||| | | | | || | || | || | ||||| | || ||||| Sbjct 5400178 CTTCTGGAGCAAA------GACTTTTTCTTCACCAGAAACCTTCACACTGATATGTGGTT 5400231 Query 518430 TATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGT 518489 | | || ||||||| || || | || | || || ||| || || || Sbjct 5400232 TTCCATTCTTGTTGGTAACTTTGAAAGGATAATACTGAATGTCCTTTTGGACTGATTTGT 5400291 Query 518490 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTA-ATT 518548 ||| || | ||||||||| || || |||||||||| || || || ||| | Sbjct 5400292 CATCCCAAGTACGACCAATTAAACGCTTGACATCAAAAATGGTGTTTTCAGGGTTAGAGG 5400351 Query 518549 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCT---CTGTAAATGAAACA 518605 |||| |||| ||| |||||||||||||||| | |||| ||| | || || | ||| Sbjct 5400352 TCAGC-TGATTTTTAGCTGCATCTCCAATCAAACGTTCGTTCTCCGCAGTGAAAGCTACA 5400410 Query 518606 TATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGC 518665 || ||||| || |||| || ||||||||||| ||||| ||||| || ||||||| Sbjct 5400411 TAAGATGGGGTGATGCGGTTTCCTTGATCATTGGCAATGATTTCTACACGTCCATTTTTA 5400470 Query 518666 CATACACCTACAC 518678 | ||||| |||| Sbjct 5400471 AACACACCAACAC 5400483 >seq1 Length=5562293 Score = 104 bits (114), Expect = 2e-16 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || || |||||||| |||| ||||| || || || ||||| || || | || ||| Sbjct 3892426 TTCTTGTCTAGACCATAAGCAATGGCAGCTGCTGTGGGCTCATTGATGATACGCAGAACG 3892367 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||||||||| || | || |||||||||||||| |||||||| || |||||||| || Sbjct 3892366 TTAAGACCAGAGATGGTGCCAGCATCTTTAGTGGCCTGTCTTTGGGAGTCGTTAAAGTAG 3892307 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || || || | || |||| Sbjct 3892306 GCTGGGACTGTGACGACAGCAT 3892285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780804634860748