Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq46 89.7 6e-13 seq40 89.7 6e-13 >seq46 Length=1907351 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 ||| || |||||||||||| |||||| ||||||| ||| | ||||| | ||| ||||| Sbjct 1804161 GATAAGTTCATTACTGAAGGTAAGTCCTGGCATGATTCCCCGCTTCTTCAACCAGAAGAT 1804220 Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 |||| ||| || ||| |||||||||||||||||| Sbjct 1804221 GGCAGCAAAGCTCCCACTGAAGAAGATGCCCTCCACA 1804257 >seq40 Length=2822076 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 ||| || |||||||||||| |||||| ||||||| ||| | ||||| | ||| ||||| Sbjct 2222439 GATAAGTTCATTACTGAAGGTAAGTCCTGGCATGATTCCCCGCTTCTTCAACCAGAAGAT 2222498 Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 |||| ||| || ||| |||||||||||||||||| Sbjct 2222499 GGCAGCAAAGCTCCCACTGAAGAAGATGCCCTCCACA 2222535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973364332400