Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq250 187 2e-41 seq63 138 9e-27 seq37 120 2e-21 seq31 120 2e-21 seq1 100 2e-15 seq111 91.5 1e-12 >seq250 Length=662674 Score = 187 bits (206), Expect = 2e-41 Identities = 534/811 (66%), Gaps = 20/811 (2%) Strand=Plus/Plus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 ||||||| | ||| | || || || || ||||| |||| |||| | || |||| Sbjct 542074 TGGAGATACACATTTAGGAGGTGAGGACTTTGACCATAGGATGGTGGACCACTTTGTGC- 542132 Query 551847 GAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTC--TTCGTC 551904 |||| || ||||| || |||| ||| |||||| | ||| |||| | | | Sbjct 542133 -AAGAATTCAAACGCAAGTACAACAAAGATATATCTAAAAA--CCAGCGCTCCCTGAGAC 542189 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTC-ATCTGGTACTCAAACCACT 551963 | || ||| |||| || || | || ||| || | || || | | | | || | ||| | Sbjct 542190 GACTTAGATCTGCGTGTGAGCGTGCAAAAAGAACACTGTCGAACAGCT-CTGAGGCCAAT 542248 Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAA 552023 |||||||| |||||| | |||||||| || || | | | | ||||| ||||| | Sbjct 542249 ATTGAAGTTGATTCACTTTTTGAGGGCATAGACTTTTACAGTAAAATTTCCAGGGCTCGA 542308 Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTA 552083 ||||| || | ||| ||||| | || ||| || | ||||| || || | | ||| Sbjct 542309 TTTGAGGAGTTGTGTGCTGATTTATTCCGAAGCACCCTGGAACCGGTTGAGAAGGCTTTG 542368 Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143 ||||| | || | |||||||| ||||| ||||| | || ||||| || ||||| || Sbjct 542369 CGAGATGCCAAATTGGATAAATCTAAAGTGAATGAAGTAGTCCTTGTAGGAGGATCAACT 542428 Query 552144 AGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAA---TGGTAAAAAATTAAAT 552200 ||||||| ||| ||| ||| | || |||||| ||| || | | ||| Sbjct 542429 CGAATTCCAAAAGTTC---AAAAGCTACTGCAAGATTTCATGGCTGGAAAGGAGCTGAAT 542485 Query 552201 GAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 || |||||||||| || |||||||| ||||| || || |||| || || || | Sbjct 542486 AAATCCATTAATCCAGACGAAGCTGTTGCTTATGGAGCTGCGGTTCAGGCGGCCATCTTG 542545 Query 552261 TCTGG--ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318 | || || ||| | || | | || || || | ||||| ||||| || || ||| Sbjct 542546 ACAGGGGACCAAC--ACGACGTAATCAAAGATGTTCTGCTTGTTGATGTAACACCATTAT 542603 Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378 | || ||| | ||||| | |||||| ||||||| || | || || | || || | | Sbjct 542604 CCCTCGGTATTGAAACCGCTGGAGGCGTTATGACCAAGTTAATAGAGCGCAACACCAAAA 542663 Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438 | || ||| || | |||| | || ||| ||||||| || | | ||| | | Sbjct 542664 TACCAACCAAAGCGTCCCAAATATTCACCACCTATGCAGATAACCAGCCAGGAGTTTCCA 542723 Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 | ||| | |||||||||||||| | || ||||| || ||| |||| ||||| ||| Sbjct 542724 TCCAAGTGTTTGAAGGAGAAAGGGCCATGACCAAAGACAACAATAAACTGGGTACCTTTG 542783 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | || | || || || ||||| || | || || || || ||||| || || | | Sbjct 542784 AATTGAATGGGATACCCCCTGCACCCAGGGGCGTTCCACAGATTGAGGTGGAGTTTAACA 542843 Query 552559 TCGATGCCAATGGAATTTTGAATGTGACTGC 552589 | || |||||||| || ||||||| |||| Sbjct 542844 TTGACGCCAATGGCATCATGAATGTTTCTGC 542874 >seq63 Length=7786243 Score = 138 bits (152), Expect = 9e-27 Identities = 326/488 (67%), Gaps = 17/488 (3%) Strand=Plus/Minus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 |||||||||| | ||||||| || ||||| ||||||||||||||||| ||| | | Sbjct 5400483 GTGTTGGTGTGTTTAAAAATGGACGTGTAGAAATCATTGCCAATGATCAAGGAAACCGCA 5400424 Query 550086 CTACTCCATCTTATGTTTCTTTCA---CGGAAACTGAACATTTAGTTGGTGATGCAGCAA 550142 || ||||||||||| |||||| |||| | |||| ||| |||| |||||||| | Sbjct 5400423 TCACCCCATCTTATGTAGCTTTCACTGCGGAGAACGAACGTTTGATTGGAGATGCAGCTA 5400364 Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 || |||| || ||| ||| || || |||||||||| || ||||||||||| Sbjct 5400363 AAAATCAGCTGACCTCTAACCCTGAAAACACCATTTTTGATGTCAAGCGTTTAATTGGTC 5400304 Query 550203 GAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA 550262 | | || |||| | || || || || || ||| |||||| || || | Sbjct 5400303 GTACTTGGGATGACAAATCAGTCCAAAAGGACATTCAGTATTATCCTTTCAAAGTTACCA 5400244 Query 550263 ATGTTTCTGGAAAACCTTATAT-----TGAA-GCTACTCATGAAGGATCTGTTAAACAAT 550316 | ||||||||| |||| |||| | | || ||||| | ||| | Sbjct 5400243 ACAAGAATGGAAAACCACATATCAGTGTGAAGGTTTCTGGTGAAGAA------AAAGTCT 5400190 Query 550317 TTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTT 550376 || | |||||| || | ||| | ||||| || |||||||| | | | | | Sbjct 5400189 TTGCTCCAGAAGAAGTGTCAGCCATGGTCCTAGGGAAAATGAGGGAGATTG-CTGAAGGA 5400131 Query 550377 TTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCA 550435 | |||| ||| ||| ||| |||| || || ||||| || || || |||||||| | Sbjct 5400130 TACTTGGGCAAAAAGATTAACAATGCTGTCATTACTGTCCCTGCTTACTTTAATGATGCC 5400071 Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495 || ||||| || ||||| |||||||| |||||||| || ||||| | | ||||| Sbjct 5400070 CAGCGTCAGGCCACTAAGGATGCTGGTACAATTGCTGGTCTCAATGTCATGAGAATTATT 5400011 Query 550496 AATGAACC 550503 || ||||| Sbjct 5400010 AACGAACC 5400003 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 361730 GGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAGTGGCT 361789 ||||||||||| ||| | || |||||||| || || ||| | ||||| |||||| Sbjct 5400003 GGTTCGTTAATAATTCTCATGACATTGAGACCAGCAATTGTACCAGCATCCTTAGTGGCC 5400062 Query 361790 TGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTT 361836 ||||| || ||||||||||| || ||||| |||||||| || || || Sbjct 5400063 TGACGCTGGGCATCATTAAAGTAAGCAGGGACAGTAATGACAGCATT 5400109 >seq37 Length=2238563 Score = 120 bits (132), Expect = 2e-21 Identities = 183/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || ||||| || ||| | ||||| || | | ||||| ||||| | || | || ||| Sbjct 138506 GCGATAGGCATTGATCTGGGAACGACGTTTTCCTGTGTGGGTGTGTTTCAGCACGGGAAA 138447 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||| || ||||| ||||| || || || ||||||| ||||||| Sbjct 138446 GTCGAGATCATCGCCAACGACCAAGGCAACAGGACGACGCCCAGTTATGTTGCTTTCACA 138387 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | | || ||| | || ||| |||| | || || ||||||| Sbjct 138386 GACACTGAGAGGCTGATCGGGGATTCGGCCAAAAATCAGGTAGCTATGAACGCTACCAAC 138327 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || || |||||||||||| | | || ||| | | ||||| || | ||| |||||| Sbjct 138326 ACCATCTTTGATGCTAAAAGACTGATCGGACGTAAGTTTAACGACGAAAGTGTCCAGGCA 138267 Query 550232 GATATGAAGCATTGGCCTTTC 550252 || |||||||||||||| ||| Sbjct 138266 GACATGAAGCATTGGCCATTC 138246 Score = 114 bits (126), Expect = 1e-19 Identities = 182/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || ||||| || ||| | ||||| || | | ||||| ||||| | || | || ||| Sbjct 140766 GCGATAGGCATTGATCTGGGAACGACGTTTTCCTGTGTGGGTGTGTTTCAGCACGGGAAA 140825 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||| || ||||| ||||| || || || ||||||| ||||||| Sbjct 140826 GTCGAGATCATCGCCAACGACCAAGGCAACAGGACGACGCCCAGTTATGTTGCTTTCACA 140885 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | | || ||| | || ||| |||| | || || |||| || Sbjct 140886 GACACTGAGAGGCTGATCGGGGATTCGGCCAAAAATCAGGTAGCTATGAACGCTACTAAC 140945 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || || |||||||||||| | | || ||| | | ||||| || | ||| |||||| Sbjct 140946 ACCATCTTTGATGCTAAAAGACTGATCGGACGTAAGTTTAACGACGAAAGTGTCCAGGCA 141005 Query 550232 GATATGAAGCATTGGCCTTTC 550252 || |||||||||||||| ||| Sbjct 141006 GACATGAAGCATTGGCCATTC 141026 >seq31 Length=12680670 Score = 120 bits (132), Expect = 2e-21 Identities = 359/550 (65%), Gaps = 8/550 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || ||||| || ||| | ||||| || | | ||||| ||||| | || | || ||| Sbjct 11734420 GCGATAGGCATTGATCTGGGAACGACGTTTTCCTGTGTGGGTGTGTTTCAGCACGGGAAA 11734361 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||| || ||||| ||||| || || || ||||||| ||||||| Sbjct 11734360 GTCGAGATCATCGCCAACGACCAAGGCAACAGGACGACGCCCAGTTATGTTGCTTTCACA 11734301 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | || ||| | || || |||| | || || ||||||| Sbjct 11734300 GACACGGAGAGGCTGATCGGGGATTCGGCCAAGAATCAGGTAGCTATGAACGCTACCAAC 11734241 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || || ||||| |||||| | | || ||| | | ||||| || |||||||||||| Sbjct 11734240 ACCATCTTTGACGCTAAAAGACTGATCGGACGTAAGTTTAACGACGAAACTGTTCAGGCA 11734181 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 || |||||||||||||| ||| | || | || |||||||| | | || || | Sbjct 11734180 GACATGAAGCATTGGCCATTCACGGTGGTCAGTGACGGAGGAAAACC-CAAACTGGAGGT 11734122 Query 550292 A---CTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 | ||| ||| || | ||| | ||| | || ||| |||| || ||||| | Sbjct 11734121 AGAGTTCAAGAACGA---GAAAAAGAGGTTTACTCCCGAAGAAATCAGTTCCATGGTGCT 11734065 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 | |||||||| | || ||| |||| | || || || || || || || Sbjct 11734064 GACCAAAATGAAGGAGACGGCCGAAGCTTACCTGGGACAGTCTGTCCGTGACGCGGTCAT 11734005 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || || || || ||||| ||| | | || | |||| || |||||||| ||| || Sbjct 11734004 CACAGTTCCTGCCTATTTCAATAATGCTCAGAGAGAAGCCACCAAAGATGCCGGAGTGAT 11733945 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 || || || ||||| || | || |||| || || || || || || || || || || Sbjct 11733944 AGCCGGCCTCAATGTCCTCAGGATCGTCAACGAGCCCACGGCCGCAGCCCTGGCTTACGG 11733885 Query 550528 ACTTGATAAA 550537 || || ||| Sbjct 11733884 TCTGGACAAA 11733875 Score = 120 bits (132), Expect = 2e-21 Identities = 359/550 (65%), Gaps = 8/550 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || ||||| || ||| | ||||| || | | ||||| ||||| | || | || ||| Sbjct 11737209 GCGATAGGCATTGATCTGGGAACGACGTTTTCCTGTGTGGGTGTGTTTCAGCACGGGAAA 11737268 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||| || ||||| ||||| || || || ||||||| ||||||| Sbjct 11737269 GTCGAGATCATCGCCAACGACCAAGGCAACAGGACGACGCCCAGTTATGTTGCTTTCACA 11737328 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | || ||| | || || |||| | || || ||||||| Sbjct 11737329 GACACGGAGAGGCTGATCGGGGATTCGGCCAAGAATCAGGTAGCTATGAACGCTACCAAC 11737388 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || || ||||| |||||| | | || ||| | | ||||| || |||||||||||| Sbjct 11737389 ACCATCTTTGACGCTAAAAGACTGATCGGACGTAAGTTTAACGACGAAACTGTTCAGGCA 11737448 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 || |||||||||||||| ||| | || | || |||||||| | | || || | Sbjct 11737449 GACATGAAGCATTGGCCATTCACGGTGGTCAGTGACGGAGGAAAACC-CAAACTGGAGGT 11737507 Query 550292 A---CTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 | ||| ||| || | ||| | ||| | || ||| |||| || ||||| | Sbjct 11737508 AGAGTTCAAGAACGA---GAAAAAGAGGTTTACTCCCGAAGAAATCAGTTCCATGGTGCT 11737564 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 | |||||||| | || ||| |||| | || || || || || || || Sbjct 11737565 GACCAAAATGAAGGAGACGGCCGAAGCTTACCTGGGACAGTCTGTCCGTGACGCGGTCAT 11737624 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || || || || ||||| ||| | | || | |||| || |||||||| ||| || Sbjct 11737625 CACAGTTCCTGCCTATTTCAATAATGCTCAGAGAGAAGCCACCAAAGATGCCGGAGTGAT 11737684 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 || || || ||||| || | || |||| || || || || || || || || || || Sbjct 11737685 AGCGGGCCTCAATGTCCTCAGGATCGTCAACGAGCCCACGGCCGCAGCCCTGGCTTACGG 11737744 Query 550528 ACTTGATAAA 550537 || || ||| Sbjct 11737745 TCTGGACAAA 11737754 >seq1 Length=5562293 Score = 100 bits (110), Expect = 2e-15 Identities = 195/288 (68%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 || || || ||| | || || || | || |||| ||||| | ||||| ||||| ||| Sbjct 3893301 GACGTCACACCTTTGTCCCTCGGAATTGAGACAGCCGGAGGAGTGATGACCAATCTGATC 3893360 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 | |||||||| || ||||| ||| | | | || | || || || || || Sbjct 3893361 AAAAGAAATACCACCATTCCAACCAAACAGACGCAAACCTTCACCACATACTCTGACAAC 3893420 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 || | | ||| || || | | |||||||||||| | || || || || || Sbjct 3893421 CAGCCAGGTGTGCTGATCCAGGTGTACGAAGGAGAAAGAGCCATGACCAAGGACAACAAC 3893480 Query 552483 CAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542 | ||||| | || | || || ||||||||||| || |||||||| || |||||| Sbjct 3893481 CTGCTTGGAAAGTTCGAGTTGACTGGAATTCCTCCTGCACCCCGTGGAGTGCCTCAAATT 3893540 Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || || || ||||| || ||||||||||| || |||||||| ||||| Sbjct 3893541 GAGGTCACCTTCGACATTGATGCCAATGGTATCCTGAATGTGTCTGCT 3893588 Score = 98.7 bits (108), Expect = 8e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | || || ||||| || ||||| ||||| ||| | || || |||||||||| Sbjct 3892285 ATGCTGTCGTCACAGTCCCAGCCTACTTTAACGACTCCCAAAGACAGGCCACTAAAGATG 3892344 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| || |||| ||||| ||||| ||||| |||||||| || || || ||||| Sbjct 3892345 CTGGCACCATCTCTGGTCTTAACGTTCTGCGTATCATCAATGAGCCCACAGCAGCTGCCA 3892404 Query 550518 TTGCATATGGACTTGATAA 550536 |||| ||||| || || || Sbjct 3892405 TTGCTTATGGTCTAGACAA 3892423 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || |||||| | |||||||||||| ||||| || |||| ||| | || ||| Sbjct 3891678 GCCATCGGCATAGATCTTGGAACCACATATTCCTGTGTGGGCGTTTTCCAACACGGGAAA 3891737 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || ||||||||||| ||||| ||| | ||||| ||| |||||| | ||||| Sbjct 3891738 GTGGAGATCATTGCCAATGACCAAGGAAACCGCACTACCCCAAGTTATGTAGCCTTCACA 3891797 Query 550112 GAAACTGA 550119 || || || Sbjct 3891798 GACACCGA 3891805 >seq111 Length=4886044 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | || | ||| ||||| ||| || ||| ||||| || | || || | Sbjct 1689611 AGACGCAACACCAAATGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGG 1689552 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || |||||||||||||| || | ||| |||||||| ||||| ||||||||| Sbjct 1689551 CCATCTTCCAGCTGTTTTCCGGCAAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCT 1689492 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || || || || || || || ||||| ||||| | || | || || || || Sbjct 1689491 TTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTATCTG-ATGGCTCCACCTCAAGTGT 1689433 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || ||||| || ||||| || || |||||||| Sbjct 1689432 GATGGTCTTGCCAGTGAGGGTTTTCACAAAGATTTGCAT 1689394 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | || | ||| ||||| ||| || ||| |||||||| | || || | Sbjct 1689839 AGACGCAACACCAAATGGAGGGTGGATTCCTTCTGAATGTTGTAATCGGAGAGTGTGCGG 1689780 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || |||||||||||||| || | ||| |||||||| || || ||||||||| Sbjct 1689779 CCATCTTCCAGCTGTTTTCCGGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCT 1689720 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGAGAGT 563435 || || || || || || || ||||| || || | | | ||| ||| || || Sbjct 1689719 TTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGAGGGCTCTAC-TTCCAGTGT 1689661 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || |||||||| || |||||||| Sbjct 1689660 GATGGTCTTGCCGGTGAGGGTTTTAACAAAGATTTGCAT 1689622 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | || | ||| ||||| ||| || ||| ||||| || | || || | Sbjct 1690295 AGACGCAACACTAAATGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGG 1690236 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || |||||||||||||| || | ||| |||||||| || || ||||||||| Sbjct 1690235 CCGTCTTCCAGCTGTTTTCCGGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCT 1690176 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGAGAGT 563435 || || || || || ||| || ||||| || || | | | ||| ||| || || Sbjct 1690175 TTGTCCTGGATCTTGGCTTTGACATTTTCAATAGTGTCTGAGGGTTCTAC-TTCCAGTGT 1690117 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || |||||||| || ||||| || || |||||||| Sbjct 1690116 GATGGTCTTACCAGTGAGGGTTTTGACAAAGATTTGCAT 1690078 Score = 86.0 bits (94), Expect = 5e-11 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| |||||||| | || || | |||||| || |||||||||||||| || | ||| Sbjct 1690032 AATGTTGTAATCGGAGAGTGTGCGGCCATCTTCCAGCTGTTTTCCGGCAAAGATCAATCT 1689973 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||| || || ||||||||||| || || || || || || ||||| || Sbjct 1689972 CTGCTGATCTGGGGGGATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGT 1689913 Query 563412 ATCAGTGTG-AGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | ||| ||| || || | || || || || || |||||||| || |||| Sbjct 1689912 GTCTGAGGGCTCTAC-TTCCAGTGTGATGGTCTTGCCGGTGAGGGTTTTAACAAAGATTT 1689854 Query 563471 GCAT 563474 |||| Sbjct 1689853 GCAT 1689850 Score = 86.0 bits (94), Expect = 5e-11 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | || | ||| ||||| ||| || ||| ||||| || | || || | Sbjct 1690523 AGACGCAACACCAAATGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGG 1690464 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || |||||||||||||| || | ||| |||||||| || || ||||||||| Sbjct 1690463 CCATCTTCCAGCTGTTTTCCGGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCT 1690404 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGAGAGT 563435 || || || || || || || ||||| || || | | | ||| ||| || || Sbjct 1690403 TTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGAGGGCTCTAC-TTCCAGTGT 1690345 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || |||||||| || |||||||| Sbjct 1690344 GATGGTCTTGCCGGTGAGGGTTTTAACAAAGATTTGCAT 1690306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029277067345420