Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq250 248 6e-60 seq31 183 2e-40 seq63 165 5e-35 seq37 138 7e-27 seq1 111 1e-18 >seq250 Length=662674 Score = 248 bits (274), Expect = 6e-60 Identities = 555/820 (68%), Gaps = 24/820 (3%) Strand=Plus/Plus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATG 475422 |||| ||||||||| ||||| | || ||||| || ||||| |||| | || | || Sbjct 542067 CAACTGCTGGAGATACACATTTAGGAGGTGAGGACTTTGACCATAGGATGGTGGACCACT 542126 Query 475423 GTGTGTTGAAGATTTCAAGAGGAAA---AATAAAGTTGATCTTTCAACATCTGCTAAAGC 475479 |||| |||| ||||| | || || |||| | || | | || | | || | Sbjct 542127 TTGTGC--AAGAATTCAAACGCAAGTACAACAAAGAT-ATATCTAAAAACCAGCGCTCCC 542183 Query 475480 ATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTT-CTGCTACTC 475538 | ||||| |||||| |||| ||||| ||||| || || | || || | ||| || Sbjct 542184 --TGAGACGACTTAGATCTGCGTGTGAGCGTGCAAAAAGAACACTGTCGAACAGCT-CTG 542240 Query 475539 AAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAA 475598 | | | | ||||||||||||| |||||||| || || || | | | | | ||| | | Sbjct 542241 AGGCCAATATTGAAGTTGATTCACTTTTTGAGGGCATAGACTTTTACAGTAAAATTTCCA 542300 Query 475599 GGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAAC 475658 ||||| |||||| || | ||| ||||| | || ||| || | ||||| ||||| Sbjct 542301 GGGCTCGATTTGAGGAGTTGTGTGCTGATTTATTCCGAAGCACCCTGGAACCGGTTGAGA 542360 Query 475659 AAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAG 475718 | | | | ||||| | ||| | || ||||| |||| ||||| | || |||||||||| Sbjct 542361 AGGCTTTGCGAGATGCCAAATTGGATAAATCTAAAGTGAATGAAGTAGTCCTTGTAGGAG 542420 Query 475719 GTTCAACAAGAATTCCAAAAATAAGAGAAATGCT--TTCATCATATTTTAA---TGGTAA 475773 | ||||| ||||||||||| | ||| ||| | || | |||| | ||| || Sbjct 542421 GATCAACTCGAATTCCAAAAGTTC---AAAAGCTACTGCA--AGATTTCATGGCTGGAAA 542475 Query 475774 AAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGC 475833 || | ||| || | ||||| || ||||||||||| ||||||||||| || || || Sbjct 542476 GGAGCTGAATAAATCCATTAATCCAGACGAAGCTGTTGCTTATGGAGCTGCGGTTCAGGC 542535 Query 475834 AGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAAC 475893 || || || |||| | | |||| | | || || || | |||||||| ||||| Sbjct 542536 GGCCATCTTGACAGGGGACCAACACGACGTAATCAAAGATGTTCTGCTTGTTGATGTAAC 542595 Query 475894 TCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAA 475953 ||| | || | ||| ||||||| | |||||| ||||||| || | || || | || Sbjct 542596 ACCATTATCCCTCGGTATTGAAACCGCTGGAGGCGTTATGACCAAGTTAATAGAGCGCAA 542655 Query 475954 TACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAAC 476013 || || ||| |||| || || |||| |||| ||| | ||||| || || Sbjct 542656 CACCAAAATACCAACCAAAGCGTCCCAAATATTCACCACCTATGCAGATAACCAGCCAGG 542715 Query 476014 TGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGG 476073 || |||||||| | |||||||| ||||| | || ||||| || || ||||| || Sbjct 542716 AGTTTCCATCCAAGTGTTTGAAGGAGAAAGGGCCATGACCAAAGACAACAATAAACTGGG 542775 Query 476074 AACTTTTAATCTTGAA-GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 || ||| | ||||| || || || ||||| ||||| || ||||| || ||||| || Sbjct 542776 TACCTTTGA-ATTGAATGGGATACCCCCTGCACCCAGGGGCGTTCCACAGATTGAGGTGG 542834 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 ||| | ||||| || ||||| || | |||||| |||| Sbjct 542835 AGTTTAACATTGACGCCAATGGCATCATGAATGTTTCTGC 542874 Score = 140 bits (154), Expect = 2e-27 Identities = 395/599 (66%), Gaps = 16/599 (3%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||||||||| |||||||| || || || | ||||| | |||| || | || || Sbjct 541417 TGCAATTGGAATTGATTTGGGGACCACATTTTCCTGTGTCGGCGTTTTCCAGCACGGAAA 541476 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| || || || ||||||||||| || || | || || ||| ||||| ||||||| Sbjct 541477 AGTCGAGATCATCGCCAATGACCAGGGGAACCGGACCACGCCAAGCTATGTCGCTTTTAC 541536 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || || || || || || ||| | || ||| | || | || | ||| | ||| Sbjct 541537 GGACACAGAGAGACTGATCGGCGATTCGGCCAAAAACCAGGTGGCCTTAAATGCAAGTAA 541596 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTT---TGATGATACCACTGTCCA 474564 |||||| || ||||| ||| |||| || || || || || |||||||| | || || Sbjct 541597 TACTATATTCGATGCCAAACGATTAATCGGACGCAAGTTTAGTGATGATAGC---GTGCA 541653 Query 474565 ATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC--ATATATA 474622 || |||||| || ||||| || |||||| | || | ||| || ||||| || | Sbjct 541654 GTCGGATATGAAACACTGGCCATTCAAGGTGGTGAACGATGGCGGGAAACCCAGGCTAGA 541713 Query 474623 GAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682 | | | |||| | || || || || ||||||| | || || ||||| Sbjct 541714 GGTGGAGTACAAG--GGAGAGGTGAAGAGGTTCACACCGGAGGAGATCAGCTCCATGGTC 541771 Query 474683 TTAGCCAAAATGAAACAAACCG-CGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741 || |||| ||||| | | | |||| | ||| | || || || || || || || Sbjct 541772 TTGACCAAGATGAAGGAGATAGCCGAG-GCCTATATGGGTCAGACGGTCACCGAAGCTGT 541830 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 || || || || || ||||| || |||| || | | || || || || || || | Sbjct 541831 CATCACGGTCCCCGCCTATTTCAACAATTCACAGAGAGAGGCGACCAAGGACGCCGGCAT 541890 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 || || || || || || |||| || || |||||||| || || || ||||| || || Sbjct 541891 CATAGCGGGACTGAAGGTCCTACGGATCATCAATGAACCTACCGCGGCAGCACTAGCCTA 541950 Query 474862 TGGTCTTGATAAGA--ATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 ||| ||||| || | ||| | |||| ||||||| | |||||||| | ||||| Sbjct 541951 TGGACTTGACAAAAACATTAAGGGTGAGAA--AAATGTTCTTATCTTTGACTTAGGAGG 542007 Score = 125 bits (138), Expect = 5e-23 Identities = 363/550 (66%), Gaps = 18/550 (3%) Strand=Plus/Minus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 || || ||||| ||||| ||| |||||| | |||| |||||||| ||||| || Sbjct 553335 GGAATAGATTTGGGAACATCTTTTTCTTGTGTTGGAGTTTATCAAAATGGCAAAGTTGAC 553276 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 || ||||| ||||||||||||||||| ||||| || || || | || || || Sbjct 553275 ATTATTGCAAATGACCAAGGTAATAGGACAACCCCTAGTTACGTGGCCTTCACAAGCACC 553216 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 | | |||||||| |||| |||||| || | | | || |||| ||||| | Sbjct 553215 GGTCGACTTATTGGCGATGGAGCTAAAAGCCAGGTTACTATGAACGCTGTAAATACGGTG 553156 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTA---ATTTTGATGATACC---ACTGTCCAATCT 474568 ||||| ||||||||| | || || || | | |||||| | | | ||| || | Sbjct 553155 TTTGACGCTAAAAGACTAATAGGACGCATGTACAATGATGAAAGCGTGATTGT--AAACA 553098 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626 | || |||||||| || || || | |||||| |||||| | |||||| Sbjct 553097 G-TA---AACATTGGCCGTTCAAAGTCGTTGATGTTGAAAATAAACCGAAAGTAGAAGTT 553042 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 |||||| ||| |||| || |||| |||| ||| |||| ||| |||||| | | Sbjct 553041 GAATACA--AAGGAGAAATGAAGAGATTTACACCTGAAGAAATAAGTTCCATGGTTCTGG 552984 Query 474687 CCAAAATGAAACAAACCG-CGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 ||||||||| | || | |||| | ||||||||| || || || || || || Sbjct 552983 TTAAAATGAAAAAGACTGCCGAG-GCCTATCTTGGAGTGCCTGTCACAGACGCTGTTATC 552925 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || ||||| || || || || | || | | || || || || || | ||| Sbjct 552924 ACCGTGCCAGCGTACTTCAACAATGCCCAGAGGGAGGCCACCAAGGACGCTGCCTTGATT 552865 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||||| ||||| | || || | ||||| || || || || ||||| || | ||| Sbjct 552864 GCTGGTCTACATGTTCTGCGAATCGTCAATGAGCCCACTGCTGCAGCACTGGCGTTTGGA 552805 Query 474866 CTTGATAAGA 474875 || || |||| Sbjct 552804 CTAGAAAAGA 552795 >seq31 Length=12680670 Score = 183 bits (202), Expect = 2e-40 Identities = 404/599 (67%), Gaps = 14/599 (2%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 || |||||| |||||| | ||||| |||||| ||| || | |||| || |||| || Sbjct 10246070 TGTAATTGGAATTGATCTCGGAACAACTTACTCTTGCGTGGGGGTTTTCCAGCATGGAAA 10246011 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| || || ||||| ||||||||||| ||| ||||||| ||| || || ||||||| Sbjct 10246010 AGTGGAGATCATTGCTAATGACCAAGGCAATCGAACAACGCCAAGTTACGTCGCTTTTAC 10245951 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||||| |||| | ||||||||||| || ||| | |||| || || || || Sbjct 10245950 AGAAACCGAACGCATGATTGGAGATGCAGCCAAAAACCAAGTGGCGATGAACCCCAAGAA 10245891 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || | ||||| | || ||| | ||||| | || || || || | | || ||| Sbjct 10245890 CACAGTGTTTGACGTGAAGAGACTCATTGGAAGAAAATTCGACGAGTCTTCAGTGCAAAG 10245831 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC-AT-ATATAGAA 474625 |||||| || ||| | |||||||||||| | || ||||| || | | Sbjct 10245830 CGATATGAAGCACTGGTCATTTAAGGTGATAGACAAACAAGGAAAACCGATGGTTCAAGT 10245771 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCA--CCGGAACAAATTTCTTCAATGGTTT 474683 | |||| | | | | | | | || ||||| || ||| |||| |||||||| | Sbjct 10245770 GGAATATAAGAATG----AGTTGAAAACTTTCAGTCCAGAAGAAATCAGCTCAATGGTGT 10245715 Query 474684 TAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | | |||||||| | || ||| | | ||| || | |||| | || || | Sbjct 10245714 TGACGAAAATGAAGGAGACGGCGGAGGCCTTTCTAGGGGATAAAGTCGGACAGGCGGTTA 10245655 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 |||| || ||||| ||||| |||||||||||||| || || || ||||| || || | Sbjct 10245654 TTACAGTACCAGCGTATTTCAATGATTCTCAACGACAGGCGACGAAAGACGCAGGCGTCA 10245595 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 ||||||| | |||| ||| | ||| |||||||||| || || || || || || || | Sbjct 10245594 TTGCAGGGTTAGATGTCTTAAGAATTGTTAATGAACCTACGGCGGCAGCTCTAGCCTACG 10245535 Query 474864 GTCTTGATAAGAATTCTGACA---AAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 || | || || |||| || || ||||| |||||||| || | |||| |||||| Sbjct 10245534 GTTTAGACAAAAATT-TGTCAGGCGAGAAG--AATGTTTTGATTTACGATTTAGGAGGT 10245479 >seq63 Length=7786243 Score = 165 bits (182), Expect = 5e-35 Identities = 322/469 (69%), Gaps = 9/469 (2%) Strand=Plus/Minus Query 474378 AAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATG 474437 ||||||| |||||||| ||||||||||| ||||| || | | || ||||| |||| Sbjct 5400468 AAAATGGACGTGTAGAAATCATTGCCAATGATCAAGGAAACCGCATCACCCCATCTTATG 5400409 Query 474438 TTTCTTTTACTG---AAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTG-CA 474493 | |||| |||| | | |||| | | ||||||||||| |||||| ||| ||||| | Sbjct 5400408 TAGCTTTCACTGCGGAGAACGAACGTTTGATTGGAGATGCAGCTAAAAATC-AGCTGACC 5400350 Query 474494 TCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGAT 474553 ||||| |||| || || |||||||||| || | || |||||||||| || ||||| Sbjct 5400349 TCTAACCCTGAAAACACCATTTTTGATGTCAAGCGTTTAATTGGTCGTACTTGGGATGAC 5400290 Query 474554 ACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAA 474613 | | |||||| || || | ||| ||||| || || | || ||| ||| Sbjct 5400289 AAATCAGTCCAAAAGGACATTCAGTATTATCCTTTCAAAGTTACCAACAAGAATGGAAAA 5400230 Query 474614 CCATATATAGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCT 474673 ||| |||| | | | |||||| ||| ||| | || ||| || | || Sbjct 5400229 CCACATATCAGTGTGAAGGTTTCTGGTGAAGAAAAAGTCTTTGCTCCAGAAGAAGTGTCA 5400170 Query 474674 TCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAG--TAA 474731 | ||||| ||| ||||||| | | || ||| ||||| ||| ||| ||| Sbjct 5400169 GCCATGGTCCTAGGGAAAATGAGGGAGATTGCTGAAGGATA-CTTGGGCAAAAAGATTAA 5400111 Query 474732 CTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAG 474791 | |||| || |||||||| || || || ||||||||| | || ||||| || ||||| | Sbjct 5400110 C-AATGCTGTCATTACTGTCCCTGCTTACTTTAATGATGCCCAGCGTCAGGCCACTAAGG 5400052 Query 474792 ATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840 |||| || | |||||| ||||| ||||| | | |||||||| ||||| Sbjct 5400051 ATGCTGGTACAATTGCTGGTCTCAATGTCATGAGAATTATTAACGAACC 5400003 Score = 161 bits (178), Expect = 6e-34 Identities = 268/385 (70%), Gaps = 8/385 (2%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 ||||||||||||||||||||||| ||||| || ||||| ||||| | | || || Sbjct 5398975 GTAAATCCTGATGAAGCTGTTGCCTATGGTGCCGCTGTACAAGCTGGAGTGTTGAGTGG- 5398917 Query 475850 CAATCAGACGA-GAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGG 475908 ||| || || ||| | || | | || | || |||| || | | | || Sbjct 5398916 -----AGAGGAAGACACTGG-TGATCTCTTGCTGTTGGATGTAAACCCCTTGACCATGGG 5398863 Query 475909 TCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATG 475968 | ||||||| |||||||| | ||||| || ||||| | || ||| |||||| Sbjct 5398862 TATTGAAACTGTTGGAGGCGTCATGACCAAACTTATCCCACGTAACACTGTCATCCCAAC 5398803 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 ||| || || | | || || || | ||||||| ||| ||||||| ||||||||| | Sbjct 5398802 CAAGAAGTCTCAGATCTTCTCTACAGCTGCTGATAACCAACCAACTGTGACCATCCAAGT 5398743 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088 |||||||| ||| | | | || |||||||| || ||||||| ||| | ||| Sbjct 5398742 GTTTGAAGGGGAACGTCCAATGACCAAAGATAACCACTTGCTTGGAAAGTTTGACCTTAC 5398683 Query 476089 AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 || ||||| || ||||| |||||||| || || ||||| ||||||||||| ||||||| Sbjct 5398682 TGGAATTCCCCCAGCTCCAAGAGGAGTCCCACAGATTGAGGTTACTTTTGAAATTGATGT 5398623 Query 476149 AAATGGTATTCTTAATGTTACTGCT 476173 |||||||| | || || || ||| Sbjct 5398622 CAATGGTATCTTGAAGGTAACAGCT 5398598 Score = 86.0 bits (94), Expect = 4e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 290852 GGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCTAAAGTTGCC 290911 ||||| || |||||||| | |||| ||||| |||||| | | | ||| ||| ||| Sbjct 5400003 GGTTCGTTAATAATTCTCATGACATTGAGACCAGCAATTGTACCAGCATCCTTAGTGGCC 5400062 Query 290912 TGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCTTT 290958 || || || ||||||||||| ||||||||||| ||||| ||||| || Sbjct 5400063 TGACGCTGGGCATCATTAAAGTAAGCAGGGACAGTAATGACAGCATT 5400109 >seq37 Length=2238563 Score = 138 bits (152), Expect = 7e-27 Identities = 364/552 (66%), Gaps = 8/552 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || || || |||||| | ||||| || | ||||| | ||| | || | || ||| Sbjct 140766 GCGATAGGCATTGATCTGGGAACGACGTTTTCCTGTGTGGGTGTGTTTCAGCACGGGAAA 140825 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || || ||||| |||||||| || || || || || |||||| |||| || Sbjct 140826 GTCGAGATCATCGCCAACGACCAAGGCAACAGGACGACGCCCAGTTATGTTGCTTTCACA 140885 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| || || || ||| | || ||| |||| | || || || ||| Sbjct 140886 GACACTGAGAGGCTGATCGGGGATTCGGCCAAAAATCAGGTAGCTATGAACGCTACTAAC 140945 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || || ||||||||||||||| |||| || ||||| ||| | || | |||||| | Sbjct 140946 ACCATCTTTGATGCTAAAAGACTGATCGGACGTAAGTTTAACGACGAAAGTGTCCAGGCA 141005 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626 || ||| |||||||| || | |||| | | || || || ||||| | | || | Sbjct 141006 GACATGAAGCATTGGCCATTCACGGTGGTCAGTGACGGAGGAAAACCCAAACTGGAGGTA 141065 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 ||| || | | | |||| || ||| | || || |||| ||| ||||| | Sbjct 141066 GAATTCAAGAACGAGAAA--AAGAGGTTTACTCCCGAGGAAATCAGTTCCATGGTGCTGA 141123 Query 474687 CCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 |||||||||| | || || |||| || || ||||| || ||| || || || Sbjct 141124 CCAAAATGAAGGAGACGGCCGAAGCT--TACCTGGGACAGTCCGTCCATGACGCCGTCAT 141181 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 || ||||| || ||||| ||| || | || | | || || ||||| || ||| || Sbjct 141182 CACAGTTCCTGCCTATTTCAATAATGCCCAGAGAGAGGCCACCAAAGACGCCGGAGTGAT 141241 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || || || ||||| | | || | || || || || || ||||| || ||||| || Sbjct 141242 AGCCGGCCTCAATGTCCTCAGGATCGTCAACGAGCCCACGGCCGCCGCCCTGGCTTACGG 141301 Query 474865 TCTTGATAAGAA 474876 ||| || ||||| Sbjct 141302 TCTGGACAAGAA 141313 Score = 129 bits (142), Expect = 4e-24 Identities = 362/552 (66%), Gaps = 8/552 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || || || |||||| | ||||| || | ||||| | ||| | || | || ||| Sbjct 138506 GCGATAGGCATTGATCTGGGAACGACGTTTTCCTGTGTGGGTGTGTTTCAGCACGGGAAA 138447 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || || ||||| |||||||| || || || || || |||||| |||| || Sbjct 138446 GTCGAGATCATCGCCAACGACCAAGGCAACAGGACGACGCCCAGTTATGTTGCTTTCACA 138387 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| || || || ||| | || ||| |||| | || || || || Sbjct 138386 GACACTGAGAGGCTGATCGGGGATTCGGCCAAAAATCAGGTAGCTATGAACGCTACCAAC 138327 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || || ||||||||||||||| |||| || ||||| ||| | || | |||||| | Sbjct 138326 ACCATCTTTGATGCTAAAAGACTGATCGGACGTAAGTTTAACGACGAAAGTGTCCAGGCA 138267 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626 || ||| |||||||| || | |||| | | || || || ||||| | | || | Sbjct 138266 GACATGAAGCATTGGCCATTCACGGTGGTCAGTGACGGAGGAAAACCCAAACTGGAGGTA 138207 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 ||| || | | | |||| || ||| | || || |||| ||| ||||| | Sbjct 138206 GAATTCAAGAACGAGAAA--AAGAGGTTTACTCCCGAGGAAATCAGTTCCATGGTGCTGA 138149 Query 474687 CCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 |||||||||| | || || |||| || || ||||| || ||| || || || Sbjct 138148 CCAAAATGAAGGAGACGGCCGAAGCT--TACCTGGGACAGTCCGTCCGTGACGCCGTCAT 138091 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 || ||||| || ||||| ||| || | || | | || || ||||| || ||| || Sbjct 138090 CACAGTTCCTGCCTATTTCAATAATGCCCAGAGAGAGGCCACCAAAGACGCCGGAGTGAT 138031 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || || || ||||| | | || | || || || || || ||||| || ||||| || Sbjct 138030 AGCCGGCCTCAATGTCCTCAGGATCGTCAACGAGCCCACGGCCGCCGCCCTGGCTTACGG 137971 Query 474865 TCTTGATAAGAA 474876 ||| || || || Sbjct 137970 TCTGGACAAAAA 137959 >seq1 Length=5562293 Score = 111 bits (122), Expect = 1e-18 Identities = 204/295 (69%), Gaps = 3/295 (1%) Strand=Plus/Plus Query 475881 TTGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAAT 475939 |||||| |||| || || | || | || |||| |||| ||||| | ||||| ||| Sbjct 3893295 TTGTTGGACGTCACACCTTTGTCCCTCGGAATTGAGACAGCCGGAGGAGTGATGACCAAT 3893354 Query 475940 CTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCT 475999 || || | |||||||| | || ||| |||| | | || || |||| || ||| Sbjct 3893355 CTGATCAAAAGAAATACCACCATTCCAACCAAACAGACGCAAACCTTCACCACATACTCT 3893414 Query 476000 GATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGAT 476059 || || || || ||| ||||| | | ||||| |||||| | || || || Sbjct 3893415 GACAACCAGCCAGGTGTGCTGATCCAGGTGTACGAAGGAGAAAGAGCCATGACCAAGGAC 3893474 Query 476060 AATAACAAACTTGGAACTTTTAATCTTGAA-GGTATTCCTCCTGCTCCCAGAGGAGTTCC 476118 || ||| ||||||| || | |||| || ||||||||||| ||| | ||||| || Sbjct 3893475 AACAACCTGCTTGGAAAGTTCGAG-TTGACTGGAATTCCTCCTGCACCCCGTGGAGTGCC 3893533 Query 476119 TCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 ||||||||| || || || || |||||||| |||||||| || ||||| ||||| Sbjct 3893534 TCAAATTGAGGTCACCTTCGACATTGATGCCAATGGTATCCTGAATGTGTCTGCT 3893588 Score = 104 bits (114), Expect = 2e-16 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | || || ||||| || ||||| || || ||| | || || |||||||||| Sbjct 3892285 ATGCTGTCGTCACAGTCCCAGCCTACTTTAACGACTCCCAAAGACAGGCCACTAAAGATG 3892344 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || | || | |||||||| ||| | ||||| || ||||| || |||||||| || Sbjct 3892345 CTGGCACCATCTCTGGTCTTAACGTTCTGCGTATCATCAATGAGCCCACAGCAGCTGCCA 3892404 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 ||||||||||||| || ||||| Sbjct 3892405 TTGCTTATGGTCTAGACAAGAA 3892426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268163843642984