Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq118 114 2e-19 seq48 114 2e-19 seq31 114 2e-19 seq74 111 2e-18 seq40 105 8e-17 seq36 105 8e-17 seq46 91.5 2e-12 seq71 87.8 2e-11 seq11 86.0 8e-11 >seq118 Length=5410003 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| || || || || ||||||||||| || | || | Sbjct 2752200 GCTTGGCCAGTTCACCGGGCAGGAGAAGACGGACAGCGGTCTGGATTTCTCTGCTGGTAA 2752259 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| |||||||| |||| | || | | Sbjct 2752260 TGGTGGACCGCTTGTTGTAGTGAGCCAAGCGGGAGGCCTCGGCAGCGATTCTCTCAAAGA 2752319 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| |||| | || |||||||| Sbjct 2752320 TGTCATTGACGAAAGAGTTCATGATGCTCATGGCCTTGCTGGAAACACCGGTGTCGGGGT 2752379 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | || ||||||||| Sbjct 2752380 GCACCTGCTTCAAGACTTTGTAGATG 2752405 >seq48 Length=1339065 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| || || || || ||||||||||| || | || | Sbjct 1068401 GCTTGGCCAGTTCACCGGGCAGGAGAAGACGGACAGCGGTCTGGATTTCTCTGCTGGTAA 1068342 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| |||||||| |||| | || | | Sbjct 1068341 TGGTGGACCGCTTGTTGTAGTGAGCCAAGCGGGAGGCCTCGGCAGCGATTCTCTCAAAGA 1068282 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| |||| | || |||||||| Sbjct 1068281 TGTCATTGACGAAAGAGTTCATGATGCTCATGGCCTTGCTGGAAACACCGGTGTCGGGGT 1068222 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | || ||||||||| Sbjct 1068221 GCACCTGCTTCAAGACTTTGTAGATG 1068196 >seq31 Length=12680670 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| || || || ||||| |||||||| || | || | Sbjct 4407364 GCTTGGCCAGTTCACCGGGCAGGAGAAGACGGACGGCAGTCTGGATTTCTCTGCTGGTAA 4407305 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 4407304 TGGTTGAGCGCTTGTTGTAGTGAGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAATA 4407245 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | || || |||| Sbjct 4407244 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACACCGGTATCTGGGT 4407185 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || || |||||||||||| Sbjct 4407184 GCACCTGTTTCAGGACCTTGTAGATG 4407159 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| || || || ||||| |||||||| || | || | Sbjct 4416577 GCTTGGCCAGTTCACCGGGCAGGAGAAGACGGACGGCAGTCTGGATTTCTCTGCTGGTAA 4416518 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 4416517 TGGTTGAGCGCTTGTTGTAGTGAGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAATA 4416458 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | || || |||| Sbjct 4416457 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACACCGGTATCTGGGT 4416398 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || || |||||||||||| Sbjct 4416397 GCACCTGTTTCAGGACCTTGTAGATG 4416372 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| || || || ||||| |||||||| || | || | Sbjct 4425789 GCTTGGCCAGTTCACCGGGCAGGAGAAGACGGACGGCAGTCTGGATTTCTCTGCTGGTAA 4425730 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 4425729 TGGTTGAGCGCTTGTTGTAGTGAGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAATA 4425670 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | || || |||| Sbjct 4425669 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACACCGGTATCTGGGT 4425610 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || || |||||||||||| Sbjct 4425609 GCACCTGTTTCAGGACCTTGTAGATG 4425584 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || || ||||||||||| | | || Sbjct 1941517 GCTTGGCCAATTCACCGGGCAGGAGAAGACGGACAGCAGTCTGGATCTCTCTGCTAGTGA 1941458 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 1941457 TGGTGGAACGCTTGTTGTAGTGGGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAAGA 1941398 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | ||| ||||||| Sbjct 1941397 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACGCCGGTATCGGGGT 1941338 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || | || ||||||||| Sbjct 1941337 GCACCTGTTTCAAGACTTTGTAGATG 1941312 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || || ||||||||||| | | || Sbjct 1950181 GCTTGGCCAATTCACCGGGCAGGAGAAGACGGACAGCAGTCTGGATCTCTCTGCTAGTGA 1950122 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 1950121 TGGTGGAACGCTTGTTGTAGTGGGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAAGA 1950062 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | ||| || |||| Sbjct 1950061 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACGCCGGTATCAGGGT 1950002 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || | || ||||||||| Sbjct 1950001 GCACCTGTTTCAAGACTTTGTAGATG 1949976 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || || ||||||||||| | | || Sbjct 1959410 GCTTGGCCAATTCACCGGGCAGGAGAAGACGGACAGCAGTCTGGATCTCTCTGCTAGTGA 1959351 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 1959350 TGGTGGAACGCTTGTTGTAGTGGGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAAGA 1959291 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | ||| || |||| Sbjct 1959290 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACGCCGGTATCAGGGT 1959231 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || | || ||||||||| Sbjct 1959230 GCACCTGTTTCAAGACTTTGTAGATG 1959205 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || || ||||||||||| | | || Sbjct 1968770 GCTTGGCCAATTCACCGGGCAGGAGAAGACGGACAGCAGTCTGGATCTCTCTGCTAGTGA 1968711 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 1968710 TGGTGGAACGCTTGTTGTAGTGGGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAAGA 1968651 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | ||| || |||| Sbjct 1968650 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACGCCGGTATCAGGGT 1968591 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || | || ||||||||| Sbjct 1968590 GCACCTGTTTCAAGACTTTGTAGATG 1968565 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || || ||||||||||| | | || Sbjct 1978127 GCTTGGCCAATTCACCGGGCAGGAGAAGACGGACAGCAGTCTGGATCTCTCTGCTAGTGA 1978068 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 1978067 TGGTGGAACGCTTGTTGTAGTGGGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAAGA 1978008 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | ||| || |||| Sbjct 1978007 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACGCCGGTATCAGGGT 1977948 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || | || ||||||||| Sbjct 1977947 GCACCTGTTTCAAGACTTTGTAGATG 1977922 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || || ||||||||||| | | || Sbjct 1987481 GCTTGGCCAATTCACCGGGCAGGAGAAGACGGACAGCAGTCTGGATCTCTCTGCTAGTGA 1987422 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 1987421 TGGTGGAACGCTTGTTGTAGTGGGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAAGA 1987362 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | ||| || |||| Sbjct 1987361 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACGCCGGTATCAGGGT 1987302 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || | || ||||||||| Sbjct 1987301 GCACCTGTTTCAAGACTTTGTAGATG 1987276 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || || ||||||||||| | | || Sbjct 1996827 GCTTGGCCAATTCACCGGGCAGGAGAAGACGGACAGCAGTCTGGATCTCTCTGCTAGTGA 1996768 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 1996767 TGGTGGAACGCTTGTTGTAGTGGGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAAGA 1996708 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | ||| || |||| Sbjct 1996707 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACGCCGGTATCAGGGT 1996648 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || | || ||||||||| Sbjct 1996647 GCACCTGTTTCAAGACTTTGTAGATG 1996622 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || || ||||||||||| | | || Sbjct 2005993 GCTTGGCCAATTCACCGGGCAGGAGAAGACGGACAGCAGTCTGGATCTCTCTGCTAGTGA 2005934 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 2005933 TGGTGGAACGCTTGTTGTAGTGGGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAAGA 2005874 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | ||| || |||| Sbjct 2005873 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACGCCGGTATCAGGGT 2005814 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || | || ||||||||| Sbjct 2005813 GCACCTGTTTCAAGACTTTGTAGATG 2005788 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || || ||||||||||| | | || Sbjct 2015376 GCTTGGCCAATTCACCGGGCAGGAGAAGACGGACAGCAGTCTGGATCTCTCTGCTAGTGA 2015317 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||| ||| |||| | |||| | |||| | Sbjct 2015316 TGGTGGAACGCTTGTTGTAGTGGGCCAAGCGGGAGGCTTCGGCGGCGATTCTCTCGAAGA 2015257 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | ||| || |||| Sbjct 2015256 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACGCCGGTATCAGGGT 2015197 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || | || ||||||||| Sbjct 2015196 GCACCTGTTTCAAGACTTTGTAGATG 2015171 >seq74 Length=1819665 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| || || || || ||||||||||| || | || | Sbjct 739503 GCTTGGCCAGTTCACCGGGCAGGAGAAGACGGACAGCGGTCTGGATTTCTCTGCTGGTAA 739444 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| |||| ||| |||||||| |||| | || | | Sbjct 739443 TGGTAGAACGCTTGTTGTAGTGAGCCAAGCGGGAGGCCTCGGCAGCGATCCTCTCAAAGA 739384 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| |||| | || |||||||| Sbjct 739383 TGTCATTGACGAAAGAGTTCATGATGCTCATGGCCTTGCTGGAAACACCGGTGTCGGGGT 739324 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | || ||||||||| Sbjct 739323 GCACCTGCTTCAAGACTTTGTAGATG 739298 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| || || || || ||||||||||| || | || | Sbjct 748698 GCTTGGCCAGTTCACCGGGCAGGAGAAGACGGACAGCGGTCTGGATTTCTCTGCTGGTAA 748639 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| |||| ||| |||||||| |||| | || | | Sbjct 748638 TGGTAGAACGCTTGTTGTAGTGAGCCAAGCGGGAGGCCTCGGCAGCGATCCTCTCAAAGA 748579 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| |||| | || |||||||| Sbjct 748578 TGTCATTGACGAAAGAGTTCATGATGCTCATGGCCTTGCTGGAAACACCGGTGTCGGGGT 748519 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | || ||||||||| Sbjct 748518 GCACCTGCTTCAAGACTTTGTAGATG 748493 >seq40 Length=2822076 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || ||||| |||||||| || | || || Sbjct 1314792 GCTTGGCCAATTCACCGGGCAGGAGAAGACGAACGGCAGTCTGGATTTCTCTGCTGGTGA 1314733 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| |||| ||| ||| || | | |||| | |||| | Sbjct 1314732 TGGTTGAGCGCTTGTTGTAGTGAGCCAAGCGGGAGGCTTCAGCGGCGATTCTCTCGAAGA 1314673 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | || || |||| Sbjct 1314672 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACACCGGTATCAGGGT 1314613 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || || || ||||||||| Sbjct 1314612 GCACCTGTTTCAGGACTTTGTAGATG 1314587 Score = 91.5 bits (100), Expect = 2e-12 Identities = 150/210 (71%), Gaps = 11/210 (5%) Strand=Plus/Plus Query 869192 CTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAG 869251 ||||| | ||| || || |||| || || ||||||| || |||||||| | ||| ||| Sbjct 2222437 CTGATAAGTTCATTACTGAAGGTAAGTCCTGGCATGATTCCCCGCTTCTTCAACCAGAAG 2222496 Query 869252 ATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCG 869310 ||||| ||| || || || ||| ||||||||||| || || |||||| | | | || Sbjct 2222497 ATGGCAGCA-AAGCTCCCACTGAAGAAGATGCCCTCCACAGCAGCAAAGGCCACCACCCT 2222555 Query 869311 CTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTT 869367 ||| || | ||| || | |||| || ||||||||| || |||||||| ||||| Sbjct 2222556 CTCCCCATA---GTC-AG--CTTCCTGGTCCCCGATCCACTTGATGGCCCAGTCTGCCTT 2222609 Query 869368 TTTCCTCACCGACGGCACCGTGTCGATGGC 869397 ||| | || | |||| ||| || || || Sbjct 2222610 CTTCTTGACACAAGGCATCGTCTCAATTGC 2222639 >seq36 Length=2365311 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || ||||| |||||||| || | || || Sbjct 522904 GCTTGGCCAATTCACCGGGCAGGAGAAGACGAACGGCAGTCTGGATTTCTCTGCTGGTGA 522963 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| |||| ||| ||| || | | |||| | |||| | Sbjct 522964 TGGTTGAGCGCTTGTTGTAGTGAGCCAAGCGGGAGGCTTCAGCGGCGATTCTCTCGAAGA 523023 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | || || |||| Sbjct 523024 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACACCGGTATCAGGGT 523083 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || || || ||||||||| Sbjct 523084 GCACCTGTTTCAGGACTTTGTAGATG 523109 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || ||||| |||||||| || | || || Sbjct 533963 GCTTGGCCAATTCACCGGGCAGGAGAAGACGAACGGCAGTCTGGATTTCTCTGCTGGTGA 534022 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| |||| ||| ||| || | | |||| | |||| | Sbjct 534023 TGGTTGAGCGCTTGTTGTAGTGAGCCAAGCGGGAGGCTTCAGCGGCGATTCTCTCGAAGA 534082 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | || || |||| Sbjct 534083 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACACCGGTATCAGGGT 534142 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || || || ||||||||| Sbjct 534143 GCACCTGTTTCAGGACTTTGTAGATG 534168 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || ||||| |||||||| || | || || Sbjct 545044 GCTTGGCCAATTCACCGGGCAGGAGAAGACGAACGGCAGTCTGGATTTCTCTGCTGGTGA 545103 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| |||| ||| ||| || | | |||| | |||| | Sbjct 545104 TGGTTGAGCGCTTGTTGTAGTGAGCCAAGCGGGAGGCTTCAGCGGCGATTCTCTCGAAGA 545163 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | || || |||| Sbjct 545164 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACACCGGTATCAGGGT 545223 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || || || ||||||||| Sbjct 545224 GCACCTGTTTCAGGACTTTGTAGATG 545249 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || ||||| |||||||| || | || || Sbjct 556132 GCTTGGCCAATTCACCGGGCAGGAGAAGACGAACGGCAGTCTGGATTTCTCTGCTGGTGA 556191 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| |||| ||| ||| || | | |||| | |||| | Sbjct 556192 TGGTTGAGCGCTTGTTGTAGTGAGCCAAGCGGGAGGCTTCAGCGGCGATTCTCTCGAAGA 556251 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||| | || || |||| Sbjct 556252 TGTCGTTGACGAAAGAATTCATGATGCTCATGGCCTTGCTGGAAACACCGGTATCAGGGT 556311 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || || || ||||||||| Sbjct 556312 GCACCTGTTTCAGGACTTTGTAGATG 556337 >seq46 Length=1907351 Score = 91.5 bits (100), Expect = 2e-12 Identities = 150/210 (71%), Gaps = 11/210 (5%) Strand=Plus/Plus Query 869192 CTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAG 869251 ||||| | ||| || || |||| || || ||||||| || |||||||| | ||| ||| Sbjct 1804159 CTGATAAGTTCATTACTGAAGGTAAGTCCTGGCATGATTCCCCGCTTCTTCAACCAGAAG 1804218 Query 869252 ATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCG 869310 ||||| ||| || || || ||| ||||||||||| || || |||||| | | | || Sbjct 1804219 ATGGCAGCA-AAGCTCCCACTGAAGAAGATGCCCTCCACAGCAGCAAAGGCCACCACCCT 1804277 Query 869311 CTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTT 869367 ||| || | ||| || | |||| || ||||||||| || |||||||| ||||| Sbjct 1804278 CTCCCCATA---GTC-AG--CTTCCTGGTCCCCGATCCACTTGATGGCCCAGTCTGCCTT 1804331 Query 869368 TTTCCTCACCGACGGCACCGTGTCGATGGC 869397 ||| | || | |||| ||| || || || Sbjct 1804332 CTTCTTGACACAAGGCATCGTCTCAATTGC 1804361 >seq71 Length=3982359 Score = 87.8 bits (96), Expect = 2e-11 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 1628435 TCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCC 1628494 || || |||| ||| ||||||||| ||||||| ||||| || | ||||| |||| Sbjct 1381270 TCTCCACGCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAAATCGCGGGCCC 1381211 Query 1628495 GGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCC 1628554 | |||||||| || |||||| ||| ||| || | | || |||||| || |||| Sbjct 1381210 TCTGTTCCTCCTTCCCTGTGTTCTTCTTGCAGTCCAGGAACTGGAAAATGTCTGCATGCC 1381151 Query 1628555 ACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 | ||||||||||| ||||||||| || Sbjct 1381150 ATGGCTCCAGGTAAATGGCAAAGGCACC 1381123 >seq11 Length=5300508 Score = 86.0 bits (94), Expect = 8e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || || ||| | |||||||| | | || ||| | || || ||||||||||| Sbjct 5247651 GCTGCTAATTACTTGGACATCAAAGGTTTACTAGATGTCACCTGTAAAACTGTGGCCAAC 5247710 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||| || || || |||||||||||| | |||||||| ||||||||| ||| Sbjct 5247711 ATGATCAAAGGGAAATCTCCCGAGGAGATCAGAAAGACCTTCAACATCAAGAACG 5247765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107109820843486