Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq31 277 1e-68 seq250 266 2e-65 seq63 152 4e-31 seq1 105 5e-17 >seq31 Length=12680670 Score = 277 bits (306), Expect = 1e-68 Identities = 1063/1644 (65%), Gaps = 53/1644 (3%) Strand=Plus/Plus Query 281261 TAATTTTCTAATTCATTTTTAGAATCAACAGCAG-CTTTTTTCTTGTTATCTGCTTCTTC 281319 |||||||| | || |||||| || | || ||| | |||| || | ||| |||||| Sbjct 10244448 TAATTTTCCAGTTGATTTTTGGACTGTAC-GCATTCCCTTTTGTTCTCATCCTCTTCTTG 10244506 Query 281320 AAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT 281379 | ||| || |||||| || ||||| ||||||| | ||| || || ||| | Sbjct 10244507 ATATTTTTCGGCTTCTGAAACCATTCGATCAATTTCAGCTTTGCTGAGTCGTCCTTTGTC 10244566 Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| || | || || ||| | || || || | |||| ||||| | Sbjct 10244567 ATTCGTAATGGTTACTTTATTTGATCTTCCAGTGCTCTTGTCGACAGCAGAAACATTCAA 10244626 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||| | || ||||| | ||||||| || ||||| || || || ||||| | || || Sbjct 10244627 AATGCAGTTCGCATCTAGATCAAATTCCACATCAATCTGCGGAACACCTCTTGGTGCTGG 10244686 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||| || || | || ||| |||| || |||| || || || | ||||| Sbjct 10244687 TGGAATACCCGTTAGATCAAAGTTTCCGAGTTTATGGTTGTCACGGGTCATGGCGCGTTC 10244746 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 || ||||| | || || || | | ||| | || || || ||||| ||| ||| Sbjct 10244747 TCCTTCGAACACCTGTATGTGTACACCTGGCTGACTGTCCGAGTACGTTGTGAATG-TCT 10244805 Query 281620 GGATT-TTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAG 281678 | | |||| |||||||| | || || ||||| | || ||||| | || || | Sbjct 10244806 TGCTGGTTTTGCAAGGAATGCGACTATTCCTGTCAATTAGGTTTGTCATTACGCCGCCTG 10244865 Query 281679 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTTTT 281737 ||||||||| ||||| || | |||| || |||| ||||| | | ||| ||| Sbjct 10244866 CTGTTTCTATCCCAAGGGATAAGGGAGCAACGTCAATTAGGAGTACGTCTTTTAAGG--- 10244922 Query 281738 TCATCAGTTTGA----CCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 281793 ||||| | | || |||| || || || |||||||| |||||||| ||||| || Sbjct 10244923 -CATCACTGGAATCCCCCGACAA-AACGGCAGCCTGAATAGCGGCACCATACGCAACCGC 10244980 Query 281794 TTCATCAGGATTAA----CAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 281849 ||| || ||||| | | | |||| || ||| |||| |||| | |||| Sbjct 10244981 TTCGTCTGGATTTATTGACCGATTCAATTCCTTTCCGCCCATG----AAATCAGTGAGAA 10245036 Query 281850 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 281909 ||| | | ||| || || || | || || || ||||| ||||| ||||| | | | Sbjct 10245037 GTTTTTGGATCTTTGGTATTCGTGTAGAACCACCCACTAAAACAATATCATGGATTTTGG 10245096 Query 281910 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACA 281969 |||| || | |||| |||| ||| || || |||||||| | | | || | Sbjct 10245097 ATTTTTCTAACTTTGCATCCTTTAACGCTCGCTCCACGGGTTCCATGGTGCTTTTGAAAA 10245156 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 282029 ||| |||||||||||||||||| || | ||||| || | ||||||| || | Sbjct 10245157 GGTCGGAACAAAGTTCTTCGAATCGCGCGCGAGTAATTTTGGTGTAGAAATCAATGCCCT 10245216 Query 282030 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 282089 || | || |||| ||| || | | | || | ||||| | | || || | Sbjct 10245217 CGGTTAGCGAGTCAATTTCTATGCTTGCCTCCGTGCTACTTGATAGAGTCCTCTTGGCTC 10245276 Query 282090 GTTCACATGCTGTCCTTAGTCTTC-GTAAG-GCTTTTGCTGATTGATTCAAATCTGTTTT 282147 ||||||| || |||| || |||| | || || || | ||| | | |||| | | Sbjct 10245277 GTTCACACGCCGTCCGTAACCTTCTGAGAGCTCTATTATTTTTTG--TAATATCTCTCTG 10245334 Query 282148 ATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCA 282205 | ||| | |||||| |||| ||| | || | || | | || || ||||| || Sbjct 10245335 GTGTTTACGCTTGAATTCTTTGACAAA--GTGGTCAACCATCCTGTTGTCGAAATCCTCT 10245392 Query 282206 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAGA 282262 ||||||| | |||| || | |||| ||||| ||||| || || |||| Sbjct 10245393 CCTCCCAGGTGTGTATCCCCCGCTGTAGACTGTACTTCGAAAACCGAGCCTTCATCAATC 10245452 Query 282263 GACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC- 282321 | | || | |||||| || ||||| || | ||| |||| | |||||| | || Sbjct 10245453 GTAAGAATCGAAACATCGAAAGTACCACCTCCTAAATCGTAAATCAAAACATTCTTCTCG 10245512 Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 || | ||||| || | ||| || || | ||| || || || |||||||||| ||| Sbjct 10245513 CCTGAC-AAATTTTTGTCTAAACCGTAGGCTAGAGCTGCCGCCGTAGGTTCATTAACAAT 10245571 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 ||| || |||| | || ||||| ||||| ||||| || || |||| ||| ||||| Sbjct 10245572 TCTTAAGACATCTAACCCTGCAATGACGCCTGCGTCTTTCGTCGCCTGTCGTTGAGAATC 10245631 Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCT 282501 || ||||| || || || |||||||| || | | ||| || ||| || || || Sbjct 10245632 ATTGAAATACGCTGGTACTGTAATAACCGCCTGTCCGACT--TTATCCCCTAGAAAGGCC 10245689 Query 282502 T--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA--GAATATT 282557 | || || | |||||||| | || | |||||| |||| ||||||| ||| || Sbjct 10245690 TCCGCCGTCTCCTTCATTTTCGTCAACACCATTGAGCTGATTTCTTCTGGACTGAAAGTT 10245749 Query 282558 GCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AATAA 282614 || | ||||| | |||| |||| || ||| || || || || | Sbjct 10245750 --TTCAACTCATTCTTATATTCCACTTGAACCATCGGT---TTTCCTTGTTTGTCTATCA 10245804 Query 282615 CTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACC 282672 | ||||||| ||| | |||||||| ||| |||| | || | || | ||| || Sbjct 10245805 CCTTAAATGACCAGTGCTTCATATCGCTTTG--CACTGAAGACTCGTCGAATTTTCTTCC 10245862 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||| | || || | ||||| | || || | || || | || |||| | |||||| Sbjct 10245863 AATGAGTCTCTTCACGTCAAACACTGTGTTCTTGGGGTTCATCGCCACTTGGTTTTTGGC 10245922 Query 282733 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 282792 |||||||||||||| |||| || |||||||| | || || ||| ||||| ||||| Sbjct 10245923 TGCATCTCCAATCATGCGTTCGGTTTCTGTAAAAGCGACGTAACTTGGCGTTGTTCGATT 10245982 Query 282793 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 282852 ||||| ||||| ||||| || || ||||| |||| || | || || || ||| | Sbjct 10245983 GCCTTGGTCATTAGCAATGATCTCCACTTTTCCATGCTGGAAAACCCCCACGCAAGAGTA 10246042 Query 282853 AGTTGTTCCTAAATCAATACCAAT 282876 ||||||||| | |||||| ||||| Sbjct 10246043 AGTTGTTCCGAGATCAATTCCAAT 10246066 >seq250 Length=662674 Score = 266 bits (294), Expect = 2e-65 Identities = 980/1520 (64%), Gaps = 35/1520 (2%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| || || || || || ||||||||| || || || |||| ||||| | Sbjct 542920 ATTGGTTATTGTGATTTTGTTGGATTTGCCAGTACTCTTGTCCATTGCAGAAACATTCAT 542861 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 || |||||||| || | | ||| || ||||| || || || || || | ||||| Sbjct 542860 GATGCCATTGGCGTCAATGTTAAACTCCACCTCAATCTGTGGAACGCCCCTGGGTGCAGG 542801 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 || ||||| | ||| | ||| || ||||| ||||| || ||||| || | | ||| Sbjct 542800 GGGTATCCCATTCAATTCAAAGGTACCCAGTTTATTGTTGTCTTTGGTCATGGCCCTTTC 542741 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 || || || | |||||| | |||| | | || ||||||| ||| || || |||| | Sbjct 542740 TCCTTCAAACACTTGGATGGAAACTCCTGGCTGGTTATCTGCATAGGTGGTGAATATTTG 542681 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| ||| || ||| | ||||| | || || | |||||||||| || ||||| Sbjct 542680 GGACGCTTTGGTTGGTATTTTGGTGTTGCGCTCTATTAACTTGGTCATAACGCCTCCAGC 542621 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTTTTT 281738 ||||| | ||| || || | || || |||||||| || | || || ||||| || Sbjct 542620 GGTTTCAATACCGAGGGATAATGGTGTTACATCAACAAGCAGAACATCTTTGA----TTA 542565 Query 281739 CATCA-GTTTGACCAA---CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 281794 | || ||| | || ||||| | || || |||| ||||| ||||| ||||||||| Sbjct 542564 CGTCGTGTTGGTCCCCTGTCAAGA-TGGCCGCCTGAACCGCAGCTCCATAAGCAACAGCT 542506 Query 281795 TCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGT 281854 || || ||||||| | || ||| || | || ||| | |||| | || || | | Sbjct 542505 TCGTCTGGATTAATGGATTTATTCAGCTCCTTTCCAGCCATGAAATCTTGCAGTAGCTTT 542446 Query 281855 CTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 281914 || || ||||| |||| ||||||||| || | || | ||||| ||| | |||||| Sbjct 542445 TGAACTTTTGGAATTCGAGTTGATCCTCCTACAAGGACTACTTCATTCACTTTAGATTTA 542386 Query 281915 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCT 281974 |||| ||| | ||| ||| | || ||||| ||||| || || || || || Sbjct 542385 TCCAATTTGGCATCTCGCAAAGCCTTCTCAACCGGTTCCAGGGTGCTTCGGAATAAATCA 542326 Query 281975 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAA 282033 | ||| | || || ||| ||| || | || | || || || || || || || || Sbjct 542325 GCACACAACTCCTCAAATCGAGCCCT-GGAAATTTTACTGTAAAAGTCTATGCCCTCAAA 542267 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | |||||||||||||| | | | || || |||| | ||| ||||| || Sbjct 542266 AAGTGAATCAACTTCAATATTGGCCTCAGAGCTGTTCGACAGTGTTCTTTTTGCACGCTC 542207 Query 282094 ACATGCTGTCCTTAGTCTTCGTAAG--GCTTTTGCTGATTGATTCAAATCTGTTTTATAT 282151 ||| || | || |||| || | | || | | | | ||| | |||| | || || Sbjct 542206 ACACGCAGATCTAAGTCGTCTCAGGGAGCGCTGGTTTTTAGAT--ATATCTTTGTTGTAC 542149 Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTC 282209 || | ||||| |||| |||| || | || | | || ||||| || ||||||| Sbjct 542148 TTGCGTTTGAATTCTT--GCACAAAGTGGTCCACCATCCTATGGTCAAAGTCCTCACCTC 542091 Query 282210 CCAATTTAGTATTTCC------TGAC-GTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 282262 | || | |||| ||| |||| | | ||| | | ||| || || || | Sbjct 542090 CTAAATGTGTATCTCCAGCAGTTGACAGAACCTCAAATATTGAA----CCCTCATCGATT 542035 Query 282263 GACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 282322 || | | |||||| || || || || | ||||| ||||| ||||| ||||| Sbjct 542034 CTCAGGATTGAAACATCGAATGTGCCCCCTCCTAAGTCAAAGATAAGAACATT--TTTCT 541977 Query 282323 TTGTCTT--GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 282380 ||| |||||| ||||| ||||| || | || || || || |||||||| || | Sbjct 541976 CACCCTTAATGTTTTTGTCAAGTCCATAGGCTAGTGCTGCCGCGGTAGGTTCATTGATGA 541917 Query 282381 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT 282440 | | | || || || || || || | || || || || || || | ||| ||||||| Sbjct 541916 TCCGTAGGACCTTCAGTCCCGCTATGATGCCGGCGTCCTTGGTCGCCTCTCTCTGTGAAT 541857 Query 282441 CGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGC 282500 ||| ||||| || || || || || || || || || || | || ||||| || Sbjct 541856 TGTTGAAATAGGCGGGGACCGTGATGACAGCTTCGGTGACCGTCTGACCCATATAGGCCT 541797 Query 282501 TTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCT 282560 ||| | | ||||| || | || | ||| || || | || || | | || Sbjct 541796 CGGCTATCTCCTTCATCTTGGTCAAGACCATGGAGCTGATCTCCTCCGGTGTGAACCTCT 541737 Query 282561 TGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAA 282620 | || | || || || | ||||| ||| | || | || || | Sbjct 541736 TCACCTCTCCCTTGTACTCCACCTCTAGCCTGGGTTTCCCGCCATCGTTCACCACCTTGA 541677 Query 282621 ATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATC 282680 ||||||| | ||||||||| || || || || | ||| |||| | | || ||||||| Sbjct 541676 ATGGCCAGTGTTTCATATCCGACTGCACGCTATCATCACTAAACTTGCGTCCGATTAATC 541617 Query 282681 GTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTC 282740 |||| ||||| || |||||||| ||| ||| | || | || | |||||| | ||| | Sbjct 541616 GTTTGGCATCGAATATAGTATTACTTGCATTTAAGGCCACCTGGTTTTTGGCCGAATCGC 541557 Query 282741 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 282800 | ||||| ||||| || ||||| | ||||| ||| || || || || || || | Sbjct 541556 CGATCAGTCTCTCTGTGTCCGTAAAAGCGACATAGCTTGGCGTGGTCCGGTTCCCCTGGT 541497 Query 282801 CATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTC 282860 |||| || || || || ||||| || | || | || || ||||| ||| || || | Sbjct 541496 CATTGGCGATGATCTCGACTTTTCCGTGCTGGAAAACGCCGACACAGGAAAATGTGGTCC 541437 Query 282861 CTAAATCAATACCAATAGCA 282880 | |||||||| ||||| ||| Sbjct 541436 CCAAATCAATTCCAATTGCA 541417 Score = 163 bits (180), Expect = 2e-34 Identities = 928/1469 (63%), Gaps = 27/1469 (2%) Strand=Plus/Plus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 ||||||||||| | ||||||||| ||||| | ||||| | || ||||| || || || Sbjct 551885 GCAGTCACATTTACAATACCATTTGCATCAATGTCAAAGTTAACCTCAATCTGTGGCACA 551944 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || | ||| || || || || | || | |||||| || | || | || |||||| Sbjct 551945 CCACAGAGAGAAGCAGGAATTCCATTCAGTTCAAATGTACCTACTATACTGTTGTCTTTA 552004 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | | || || | || | | | || ||| | | ||||| | || | || Sbjct 552005 GTCATGGCCCACTCTCCAGCAAACACGCGCACGGTGACTCCTGGCTGATTGT-TGTAGAA 552063 Query 281606 -GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 ||||| ||| | ||| | ||||||| | ||||| | ||||| | || Sbjct 552064 TGTTGTGAATGTCTTTGATGCTGCTGCAGGAATTTTGGTGTTGCAGTCAATTACTTTATC 552123 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTA---GGAC 281721 ||||| ||||| || || || | || || |||| ||| || ||||| || | |||| Sbjct 552124 CATAAACCCACCCGCAGTCTCGATGCCCAGGGAAAAAGGGGTAACATCCACCAACAGGAC 552183 Query 281722 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 | | |||| || | || ||| || ||| || || ||||| | |||||||| Sbjct 552184 A-TCTTTTACCATTCCACTTC--TTTCTCCTTTAAGTATGGCAGCTTGCACGGCAGCACC 552240 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT 281841 ||| || || || |||||| || | | || | |||||| | ||| | Sbjct 552241 ATAAGCCACTGCCTCATCAATGTTCATTGACCTGTTCAACACTTTACCTCCCATAAAGTC 552300 Query 281842 -TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 281900 || || | |||| | || ||||| | ||||||||| || || | ||| |||| Sbjct 552301 CTGCAACAT-TTGTTGAATTTTTGGAATCCTGCTTGATCCTCCCACCAACAAAATCTCAT 552359 Query 281901 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAG 281960 | | || ||| || | || || |||||| ||| ||||| || ||| | || Sbjct 552360 GAATTTGAGATGGTTCTAATTCTGCATCCAACAAAGCTTTTCTCACTGGTATTA----AG 552415 Query 281961 CTCT----AAACAAGTCTGAACAAAGT-TCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015 ||| |||||||| ||| ||| ||| || ||| | | || || || || Sbjct 552416 GTCTTAAAAAACAAGTTGCTACAGAGTGTCTCAAAAGTTA-CACGAGAAATCTTGCTATA 552474 Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 | | |||||||| ||| | | | ||| | ||||| | |||| | | || || Sbjct 552475 AAAGTCAATTCCCTCGTAAAGTGCATCCAATTCAAGACTGGTTTCGGAACTACTGGAAAG 552534 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT- 282134 | || || | ||| ||||||| | | || | || | || | ||||| || | Sbjct 552535 AATTCTCTTGGCCCTTTCGCATGCTGCCTTAAGACGTC-TGAGAGATCTGCTGTTTCCTC 552593 Query 282135 TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTAT 282194 | |||| | || |||||||| || || || |||||| | || | ||||| Sbjct 552594 TTAAATTTTTTCCATATTTTCGTTTAAATTCCTCAACAAAGTGGACAACCATCAAATTAT 552653 Query 282195 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT---C 282251 |||| ||||||||||||||| || | || | || | | |||| || | | Sbjct 552654 CAAAGTCTTCACCTCCCAATAATGTGTCCCCAGCAGTGGATAGCACTTCAAACACAGAAC 552713 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 || | |||| | | | ||||| | || || ||||| | |||||| | | | Sbjct 552714 CACCATCAACTATAACCACTGACACATCGAGTGTCCCCCCACCTAAATCAAACACCATAA 552773 Query 282312 CATTCATTTCTTT-GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 |||| | ||| | |||| ||| || || ||| |||| | || |||||||| || Sbjct 552774 CATTTCTCTCTCCAGAGATGGTCTTT-TCTAGTCCAAACGCCAGTGCTGCAGCAGTGGGC 552832 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| | |||| || ||||| ||||||||||| | || || || ||||| | Sbjct 552833 TCATTGACGATTCGCAGAACATGTAGACCAGCAATCAAGGCAGCGTCCTTGGTGGCCTCC 552892 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 || || | || ||| || || || || || || ||||| || ||||| || |||| Sbjct 552893 CTCTGGGCATTGTTGAAGTACGCTGGCACGGTGATAACAGCGTCTGTGACAGGCACTCCA 552952 Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550 | ||| || || || | |||||||||| | || ||| || |||| ||| || Sbjct 552953 AGATAGGCCTCGGCAGTCTTTTTCATTTTAACCAGAACCATGGAACTTATTTCTTCAGGT 553012 Query 282551 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 282610 | | || ||| ||| || ||| ||||| | | |||||||| |||||| | Sbjct 553013 GTAAATCTCTTCATTTCTCCTTTGTATTCAACTTCTACTTTCGGTTTATTTTCAACATCA 553072 Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 282670 | ||||| || ||||||| ||| | | | || |||| ||||| | | Sbjct 553073 ACGACTTTGAACGGCCAATGTTTACTGTTTACAATCACGCTTTCATCATTGTACATGCGT 553132 Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 || |||| || ||| || ||||| | ||||| | || | | | | || ||| Sbjct 553133 CCTATTAGTCTTTTAGCGTCAAACACCGTATTTACAGCGTTCATAGTAACCTGGCTTTTA 553192 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 ||| |||| ||||| || | | || ||| || | || || || ||||| | | Sbjct 553193 GCTCCATCGCCAATAAGTCGACCGGTGCTTGTGAAGGCCACGTAACTAGGGGTTGTCCTA 553252 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 |||||||| ||||| |||||||| |||||||| |||||||| | || || |||||| | Sbjct 553253 TTACCTTGGTCATTTGCAATAATGTCAACTTTGCCATTTTGATAAACTCCAACACAAGAA 553312 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAGC 282879 |||| |||||| ||||| || || | ||| Sbjct 553313 AAAGATGTTCCCAAATCTATTCCGACAGC 553341 >seq63 Length=7786243 Score = 152 bits (168), Expect = 4e-31 Identities = 335/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 ||||| ||||||||||||| ||||| |||||||||||| | || ||||| |||||||| Sbjct 5400003 GGTTCGTTAATAATTCTCATGACATTGAGACCAGCAATTGTACCAGCATCCTTAGTGGCC 5400062 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA--CTTCTT 282485 || | || | ||| ||||| || ||||| |||||||| || |||| ||||| ||| || Sbjct 5400063 TGACGCTGGGCATCATTAAAGTAAGCAGGGACAGTAATGACAGCAT-TGTTAATCTTTTT 5400121 Query 282486 TTCCAA-TATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 282542 |||| ||| ||| || | | ||||||| | || | ||| | ||| | || Sbjct 5400122 GCCCAAGTAT----CCTTCAGCAATCTCCCTCATTTTCCCTAGGACCATGGCTGACACTT 5400177 Query 282543 GTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATA-CTTCA-----AAATATGGTT 282596 |||||||| | | | || | || | || | ||||| | || ||||| Sbjct 5400178 CTTCTGGAGCAAA------GACTTTTTCTTCACCAGAAACCTTCACACTGATATGTGGTT 5400231 Query 282597 TATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGT 282656 | | || ||||||| || || |||| | || || ||| || || || Sbjct 5400232 TTCCATTCTTGTTGGTAACTTTGAAAGGATAATACTGAATGTCCTTTTGGACTGATTTGT 5400291 Query 282657 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTA-ACT 282715 ||| || | ||||||||| || || |||||||||| || || || ||| | Sbjct 5400292 CATCCCAAGTACGACCAATTAAACGCTTGACATCAAAAATGGTGTTTTCAGGGTTAGAGG 5400351 Query 282716 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCT---CTGTAAATGAAACA 282772 |||| |||| ||| |||||||||||||||| | |||| ||| | || || | ||| Sbjct 5400352 TCAGC-TGATTTTTAGCTGCATCTCCAATCAAACGTTCGTTCTCCGCAGTGAAAGCTACA 5400410 Query 282773 TATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGC 282832 || ||||| || |||| || ||||||||||| ||||| ||||| || ||||||| Sbjct 5400411 TAAGATGGGGTGATGCGGTTTCCTTGATCATTGGCAATGATTTCTACACGTCCATTTTTA 5400470 Query 282833 CATACACCTACAC 282845 | ||||| |||| Sbjct 5400471 AACACACCAACAC 5400483 >seq1 Length=5562293 Score = 105 bits (116), Expect = 5e-17 Identities = 113/148 (76%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || |||||||| |||| ||||| || || || ||||| || || | || ||| Sbjct 3892426 TTCTTGTCTAGACCATAAGCAATGGCAGCTGCTGTGGGCTCATTGATGATACGCAGAACG 3892367 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 |||||||||| || | || |||||||||||||| |||||||| || |||||||| || Sbjct 3892366 TTAAGACCAGAGATGGTGCCAGCATCTTTAGTGGCCTGTCTTTGGGAGTCGTTAAAGTAG 3892307 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTA 282479 || || || || | || |||| ||||| Sbjct 3892306 GCTGGGACTGTGACGACAGCAT-TGTTA 3892280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740612823712908