Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq190 212 7e-50 >seq190 Length=2335779 Score = 212 bits (234), Expect = 7e-50 Identities = 337/481 (70%), Gaps = 2/481 (0%) Strand=Plus/Minus Query 146772 CTAAACCGCCAGCGCCATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATC 146831 ||| || |||| |||||| || ||||| || | ||| |||| | ||||||| Sbjct 1049742 CTACACTGCCAAATCCATGGCTATCTTAGGGTGAGGATTGTAACCCTGAATCTCAAAATC 1049683 Query 146832 TTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGG 146891 || | |||| ||||| |||| ||||| || ||| ||||||||||| || Sbjct 1049682 CTCATACTTGAAGTCGTCAATGTTTTCCACTGTTCTTTTGATCACCAGCTTGGGGAATGG 1049623 Query 146892 TCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGC 146951 || ||| ||||| |||||||||||||||| || || | |||||| | |||||||| || Sbjct 1049622 TCTGGGTTTCCTCTCCAGCTGAATTTTCAGAGGTTCTATGTGGTTCACATAGACGTGAGC 1049563 Query 146952 GTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTA 147011 || |||| ||||| || || || || ||||| || || || | |||||| | |||||| Sbjct 1049562 ATCTCCCAAAGTGTGGACGAAATCGCCGGGCTTGAGTCCTGTGATGTGGGCTATCATGTA 1049503 Query 147012 GGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCT 147071 ||| | || || || ||||| || ||||| || ||||||||||| || ||||| || | Sbjct 1049502 GGTCAAGAGGGAATAACTGGCGATATTGAACGGCACCCCCAGGCCGATATCCCCGGATCG 1049443 Query 147072 CTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTG-GCACAGGATGTGGC 147130 |||||||||||| || ||||| || || | |||||| ||||| || | | || | Sbjct 1049442 CTGGTACAGCTGACAGGAGAGTTCGCCATTACACACGTAGAACTGAACAAAAG-CATGAC 1049384 Query 147131 ACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCC 147190 |||| || |||||||| ||||| |||||||||||| || | | | || | Sbjct 1049383 ACGGGGGAAGCGCCATCTTATCTAGGTCACAGGGGTTCCAGGCAGACATGATGATGCGTC 1049324 Query 147191 TGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGC 147250 | || || || |||| |||| || || || | || | ||||||||| || || | Sbjct 1049323 GGTCGTCCGGATTATTCTTGATCTTGTCAATGACACCTCTTAACTGGTCCACACCTTGAC 1049264 Query 147251 C 147251 | Sbjct 1049263 C 1049263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485388891200