Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq649786 176 5e-39 >seq649786 Length=1608 Score = 176 bits (194), Expect = 5e-39 Identities = 479/729 (66%), Gaps = 25/729 (3%) Strand=Plus/Plus Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858 || || ||||| ||||||||||| ||||| | || ||||| || || | || || Sbjct 167 TCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATTAAACTCACG 226 Query 16859 GGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 ||||| | || |||| ||| || || || || || || || || || ||||| | Sbjct 227 GGAAGCGAATCGGTCACAAACTCCTTT-TCAATTACTACGGCGTCTTTGATAATTTCAAT 285 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAA-ACATCA--GACATGCGAAATC 16974 || || || | | | | || | | |||||| | || | |||| || ||||| Sbjct 286 CACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAGGCAAAATC 345 Query 16975 GCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTT 17034 |||||| || || ||||| | ||| | ||| || ||||| |||| || |||||| Sbjct 346 GCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCCGGCATCAG 405 Query 17035 TCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGAC 17094 || |||||||| | |||||| || | | ||||| || || ||||| || || || || Sbjct 406 GCCGCGTTTCTTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAATCCCTTCCAC 465 Query 17095 GGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTG 17154 || ||||| || || | || || ||| Sbjct 466 GGCGGCAAAAGCAATCAGACGCTCTTGANNNNNNNNNNNNNNNNAACG------------ 513 Query 17155 CACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTC 17214 |||| |||||||| | || | ||| ||||||||||| ||||| | || | || Sbjct 514 --CCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAGCAGACGGTC 571 Query 17215 TTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTAT 17274 ||| ||||| ||| | | || ||||| ||||| || || |||||||||| || Sbjct 572 TTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTCGGAGTGGAT 631 Query 17275 GTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTAT-TTGAACTTCC- 17332 || || | ||| || || || ||||| || || ||||||| ||| ||| |||||| Sbjct 632 ATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCG-TATATTGCACTTCCG 690 Query 17333 ACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCC 17392 || | ||| ||||||| ||||||||||| || || |||||||| ||||| ||||||||| Sbjct 691 ACACAAAAT-GTTCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAAAAAACGCC 749 Query 17393 AATATATGCTTAATGAAATATTTTTCGTC-CGGTGTAAGAACGCGCCAGTCCTTTAAATC 17451 || | ||| | || |||| | || || ||| |||| | |||| || || ||||| Sbjct 750 AAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAG-CCTTGCCAATCGTTCAAATC 808 Query 17452 TTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATT 17511 || || ||| | |||||| | |||||||| || || | || | || || | || Sbjct 809 TTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGCTTCGGCTTGCTTGTAAAATTT 868 Query 17512 CCAAATATC 17520 |||||| || Sbjct 869 CCAAATGTC 877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506809588788360