Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq649786 181 1e-40 >seq649786 Length=1608 Score = 181 bits (200), Expect = 1e-40 Identities = 577/885 (65%), Gaps = 39/885 (4%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||| || || | || || || || ||||| ||||||||||||| || || || | | Sbjct 42 TTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATGT 101 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTT----CCGTA 16027 ||||||| || || ||||| || | | | ||| || || ||| || Sbjct 102 CCATAAAGTCGAAAGGATTGACGGCATTATAAA-CTTTTTGT---CCGGTTAACTCCACC 157 Query 16028 ACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATA 16087 | || | ||||| ||||| ||||||||||||||||| | || ||| || || || Sbjct 158 AGCAAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATT 217 Query 16088 AGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATG 16147 | | || ||||| | | || | ||| | | ||| || || || || ||||| || Sbjct 218 AAACTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATA 277 Query 16148 ATATCGGTGGCTCG-TGTTTCAG--ACGGTGTATGGTTTAGGTGTTTAA-ACATTA--GA 16201 || || | | || | ||| | |||| || | | ||||||| | || | || Sbjct 278 ATTTCAATCACCCGCTCTTTTGGCAACGGC---TGAATCACGTGTTTAGTATATAAATGA 334 Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 || || || |||||||| | |||||||| | ||| | ||| || ||||| | || Sbjct 335 CAGGCAAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAG 394 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAAT-GACCCCGAAAAGAA 16320 || ||||| || |||||||| | ||| || || | |||||| || ||||| ||||| Sbjct 395 CCCGGCATCAGGCCGCGTTTCTTCAGCCAAAAGATGG-AGCAAAACGAACCCGAGAAGAA 453 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG 16380 || || || || | |||||||| || | || || ||| Sbjct 454 AATCCCTTCCACGGCGGCAAAAGCAATCAGACGCTCTTGANNNNNNNNNNNNNNNNAACG 513 Query 16381 AATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTT 16440 |||| |||||||| | ||| | || ||||||||||| ||||| | Sbjct 514 --------------CCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTG 559 Query 16441 AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACAT 16500 || || ||||| ||||| || | | || |||||||| || | || | Sbjct 560 AAGCAGACGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGT 619 Query 16501 TTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTAT 16560 ||| ||||| || || || | ||| || || || || ||||| || ||| |||| ||| Sbjct 620 TTCGGAGTGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCG-TAT 678 Query 16561 -TTGTACTTCC-ACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCA 16618 ||| |||||| || ||||| |||||||||| || || || || || ||||| || || Sbjct 679 ATTGCACTTCCGACACAAAAT-GTTCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCG 737 Query 16619 GCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTC-AGATGTAAGAATATGCCA 16677 |||||||||||||| | |||| | || |||| | || || | | |||| | ||||| Sbjct 738 GCAAAAAACGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCT-TGCCA 796 Query 16678 ATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTT 16737 ||| || ||||||| || ||| | |||||| | |||||||||||| || | || | Sbjct 797 ATCGTTCAAATCTTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGCTTCGGCTTG 856 Query 16738 TTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGAC 16782 || || | ||||||||| || | || |||||||| | ||| Sbjct 857 CTTGTAAAATTTCCAAATGTCGTGGTGGGCAATGGGAAAGAGGAC 901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500805574937640