Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq307809 214 1e-50 >seq307809 Length=2175 Score = 214 bits (236), Expect = 1e-50 Identities = 496/742 (67%), Gaps = 7/742 (1%) Strand=Plus/Minus Query 18615 TTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGG 18674 ||||||||| | || |||||||| || || |||| | ||| ||||||||| |||| ||| Sbjct 1240 TTTCCTCTTCTGACAACAAAGCGCGTCTTCTGGAAAGGCGTTGTGGAAGAGCTGTTGTGG 1181 Query 18675 TTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGAT 18734 || || || || ||||| || |||| || | || | ||| || | ||||| ||||| Sbjct 1180 TTCATTCGAGGATCAACAAATGCCAAGGAGTTGGCTGAGAAAAATGTCCACATCTGGGAC 1121 Query 18735 ATATACGGATC--GAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGG 18792 | || || ||||| || || | | | ||| || | | | | || | Sbjct 1120 GCCAATGGCTCACGAGCA--TTCCTCGACAAAATTGGTTTAAACGATCGTGAGGAAGGCG 1063 Query 18793 ACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTC 18852 ||||||| || | || || || |||||| | |||| || || || || |||||| | Sbjct 1062 ACCTTGGACCGGTGTATGGTTTTCAGTGGCGTCATTCAGGCGCTGATTACAAAGACATGC 1003 Query 18853 AATCAA-ACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAA 18911 | ||| | ||| ||| || | |||||||| || ||| || || | |||||| Sbjct 1002 A-TCATGATTATACTGGGCAGGGTGTGGATCAGCTAAAAGATGTGATTGAGAAGATTAAA 944 Query 18912 ACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTA 18971 | ||| | | ||||||||||||| | | |||||||| || ||| | ||| | Sbjct 943 AGTTCACCAAATGACAGACGAATGATTATGTGTGCGTGGAATCCGAAAGATCTTCCCAAA 884 Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || || ||||| ||| | | ||||| || ||||| ||||| ||| | || Sbjct 883 ATGGCGCTGCCACCATGCCACGCTCTGGTGCAGTTCTATGTTGCCAACGGAGAACTCTCG 824 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 |||| | |||||| | |||| ||| | || || || || || || |||||||| | Sbjct 823 TGCCTGTTGTACCAGCGCTCGGCAGATGTTGGTCTCGGTGTTCCATTTAACATTGCCAGC 764 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATT 19151 || || | | || || || | || ||||| || ||||| | | | ||||| || || Sbjct 763 TACGCTTTGTTGACATATATGATTGCTCATGTGACTGGACTAAGACCAGGAGAGTTCATC 704 Query 19152 CATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCTA 19211 || | ||||| ||| | || ||||| ||||||| || || | || || | ||||||| Sbjct 703 CACAACATGGGTGATACTCACATTTATCTGAATCACATTGAACCGTTGAAGGAGCAGCTA 644 Query 19212 GCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGATATAAAC 19271 || |||| || |||||| || | || || | |||||||| | ||| || | Sbjct 643 AAACGCAAGCCAAGGCCATTTCCTCGCTTGAAGATCCTACGAAATGTTAAAGACATTGAT 584 Query 19272 GACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccccTAAAAATG 19331 ||||| || | || || ||| | || || || |||||||| || || || ||||| Sbjct 583 GACTTCAACTATGAAGACTTTGAACTGTTTGATTACAATCCACATCCTCCGATACAAATG 524 Query 19332 GAAATGGCTCTTTAATGGATTT 19353 | |||||| | |||| ||||| Sbjct 523 GCAATGGCAGTCTAAT-GATTT 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391423837715715