Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq307809 215 4e-51 >seq307809 Length=2175 Score = 215 bits (238), Expect = 4e-51 Identities = 449/666 (67%), Gaps = 2/666 (0%) Strand=Plus/Plus Query 101600 TTAAAGTCATCAATGCATGAAACATTTC-TAGCAAATCTAAGTGTTGGAAACGGTCTAGG 101658 || |||||||||||| | |||||||| ||| | | ||| | ||||| || || || Sbjct 576 TTGAAGTCATCAATGTCTTTAACATTTCGTAGGATCTTCAAGCGA-GGAAATGGCCTTGG 634 Query 101659 AGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCC 101718 | || | | |||| || | | |||||||||| | ||| ||||||| ||| || Sbjct 635 CTTGCGTTTTAGCTGCTCCTTCAACGGTTCAATGTGATTCAGATAAATGTGAGTATCACC 694 Query 101719 TATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAA 101778 || | ||||| |||||||| || ||| ||| |||||||||||||| | || || Sbjct 695 CATGTTGTGGATGAACTCTCCTGGTCTTAGTCCAGTCACATGAGCAATCATATATGTCAA 754 Query 101779 AAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATA 101838 | || ||||| |||||||||||||| || || | || | ||| || || | || || Sbjct 755 CAAAGCGTAGCTGGCAATGTTAAATGGAACACCGAGACCAACATCTGCCGAGCGCTGGTA 814 Query 101839 CAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACATGACAAGGCGG 101898 || | || || || | ||| | ||||| || || | | || || || || Sbjct 815 CAACAGGCACGAGAGTTCTCCGTTGGCAACATAGAACTGCACCAGAGCGTGGCATGGTGG 874 Query 101899 CAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGT 101958 || | ||||||| |||| ||| |||||| |||||||| | ||| | ||| || | Sbjct 875 CAGCGCCATTTTGGGAAGATCTTTCGGATTCCACGCACACATAATCATTCGTCTGTCATT 934 Query 101959 AGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATA 102018 || |||| || | ||||||| | ||||| || || || || | || |||| Sbjct 935 TGGTGAACTTTTAATCTTCTCAATCACATCTTTTAGCTGATCCACACCCTGCCCAGTATA 994 Query 102019 ATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGG 102078 ||| | | |||| || || || || |||| | ||||||||| |||||||| || Sbjct 995 ATCATGATGCATGTCTTTGTAATCAGCGCCTGAATGACGCCACTGAAAACCATACACCGG 1054 Query 102079 TCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCC 102138 |||||| || ||||| || | || | ||||||| ||| || | |||| || || || Sbjct 1055 TCCAAGGTCGCCTTCCTCACGATCGTTTAAACCAATTTTGTCGAGGAATGCTCGTGAGCC 1114 Query 102139 ATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCT 102198 ||| || ||||| ||||| || | | | ||| ||| | || ||||||| Sbjct 1115 ATTGGCGTCCCAGATGTGGACATTTTTCTCAGCCAACTCCTTGGCATTTGTTGATCCTCG 1174 Query 102199 GATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAG 102258 || ||||||||||| ||||| ||||| ||| |||| || || | ||| || || | ||| Sbjct 1175 AATGAACCACAACAGCTCTTCCACAACGCCTTTCCAGAAGACGCGCTTTGTTGTCAGAAG 1234 Query 102259 TGGAAA 102264 ||||| Sbjct 1235 AGGAAA 1240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353944719160277