Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq649786 217 2e-51 seq360635 89.7 6e-13 seq698540 84.2 3e-11 seq271499 84.2 3e-11 seq1631541 82.4 9e-11 >seq649786 Length=1608 Score = 217 bits (240), Expect = 2e-51 Identities = 599/912 (66%), Gaps = 26/912 (3%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 ||||| ||||| ||||| || || || || ||||||||||| || | || || || | Sbjct 41 TTTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATG 100 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCC---AATTCAGAA 23960 ||||| || ||| | |||||| ||||||| | | ||| ||| || || Sbjct 101 TCCATAAAGTCGAAAGGATTGACGGCATTATAAACTTTTTG---TCCGGTTAACTCCACC 157 Query 23961 ATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATA 24020 | ||| | ||||| |||||||| |||||| |||| | |||||| || || Sbjct 158 AGCAAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATT 217 Query 24021 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080 | | || ||||| | | || | ||| || | |||||| || |||||| | ||| Sbjct 218 AAACTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATA 277 Query 24081 ATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA-ACATCAA--ACAT 24137 || | || |||| | || | | | |||||| | || || ||| Sbjct 278 ATTTCAATCACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAG 337 Query 24138 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 24197 || |||||||| || | || ||||| | || ||||| || ||||| | | || Sbjct 338 GCAAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCC 397 Query 24198 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 24257 ||||| ||||| || || || |||||||| ||||| ||| || || || |||||||| Sbjct 398 GGCATCAGGCCGCGTTTCTTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAATC 457 Query 24258 CCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGTATCCAC 24317 ||||| || || ||||| ||||| || | ||| | || Sbjct 458 CCTTCCACGGCGGCAAAAGCAATCAGACGCTCTTGANNNNNNNNNNNNNNNNA-----AC 512 Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 24377 ||||||||||| |||||||| || || ||| || || || || | || ||| Sbjct 513 ------GCCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAGCAGA 566 Query 24378 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 24437 || ||| || | ||||| || || |||||||| | || ||| |||| || Sbjct 567 CGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTCGGAG 626 Query 24438 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 24497 || || ||||||| ||| ||||| || ||||||||| || |||| || ||| || ||| Sbjct 627 TGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCGTATATTGCACT 686 Query 24498 T-CTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556 | | | ||||||| |||| || | |||||| || || |||||||| ||||| |||||||| Sbjct 687 TCCGACACAAAAT-GTTCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAAAAAA 745 Query 24557 CGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTTATTCCAATCATTGA 24615 |||||| || || | ||||||| | || || |||| | || | | |||||| || | Sbjct 746 CGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCT-TGCCAATCGTTCA 804 Query 24616 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 24675 ||||| | || ||| | |||||| | |||||||| || || || | || || | Sbjct 805 AATCTTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGCTTCGGCTTGCTTGTAAA 864 Query 24676 TATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT-TTGGATTTTTTGCA 24734 ||||| ||||| || | ||| ||||| | ||||| | | || | ||| ||||| Sbjct 865 ATTTCCAAATGTCGTGGTGGGCAATGGGAAAGAGGACAAAGCGGTCTTTGTTTTCTTGCA 924 Query 24735 AGGATTGGTTCC 24746 | || |||||| Sbjct 925 A-AATCGGTTCC 935 >seq360635 Length=7270 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208 ||| || ||||||| ||||| || | | ||| || || |||||||| || || || | Sbjct 620 TACCTGGTATTCTCCTGACAACACCCGTCTAGTATAGATGTTACTGGTGTAAGGCTCAAA 561 Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268 | ||| ||||||||||| ||||||||||||||||| ||||| || | ||||| | Sbjct 560 ACTTTCACAGTTTCCCAAAATCTGAGCAGTTGATGCAGTTGGCATCGGAGACACCAGCAG 501 Query 53269 ACTATTTCTAAGACCGTAT 53287 |||||| | | |||||| Sbjct 500 ACTATTGCGCACTCCGTAT 482 >seq698540 Length=100 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 24207 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACT 24266 ||||| ||||| | ||| | || || ||||| ||| || |||||||||||||||||| Sbjct 98 CCACGTTTTTTCAACCAGTAAATAGAACAAAATGCTCCCGAGAAGAAAATTCCTTCTACT 39 Query 24267 GCCGCAAAGGCAATAAGTCTTTCT 24290 || ||||| ||||||||||||||| Sbjct 38 GCTGCAAAAGCAATAAGTCTTTCT 15 >seq271499 Length=3361 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 53750 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 53809 |||| || |||||||||||| ||||| || || | ||||| || | || || ||||| Sbjct 2310 TATTCTACTATCTCAGTGCAGAGATTGCTGCAGGTAATGGTCCCCAGGTTCTGCTGATTG 2369 Query 53810 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTG 53865 |||||| ||||| ||||| || || || || |||| |||||||| ||| |||| Sbjct 2370 CTCTTTCGATTACAGGCATCTTTGTAGAGCATATATGGTGTACCAGTCTCAGTCTG 2425 >seq1631541 Length=403 Score = 82.4 bits (90), Expect = 9e-11 Identities = 222/338 (66%), Gaps = 9/338 (3%) Strand=Plus/Plus Query 53546 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 53605 || || ||||| || | ||| | | |||| ||| || ||||| | || || || Sbjct 3 CCGATGCCGATGGGGCGATGGCGCATATTGGAGTTTCGCGCTTCCTCCACCGGGTAGTAG 62 Query 53606 TTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAG---T 53662 || | ||||| | ||||||||| || | ||| |||||| | || | || | Sbjct 63 TTCACGTCTATCACTTTATTGAGATTGCGCGTAATCACTTTGGTGATTTCATAAAGGCGT 122 Query 53663 TTGAGAAAATCAAATTGTCCATCTA---TTACAAACATGTTCAATGCAATAGATGCCAGA 53719 ||| ||||||| ||| ||| ||| |||| | ||| ||||| || |||| Sbjct 123 TTGT---AATCAAACCTTCCTTCTGCGTTTATAAACTTAGGCAAGGCAATGGAGGCCAAG 179 Query 53720 TTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 53779 || ||||| || || || | | | | ||||| ||| || || ||||||||||| || Sbjct 180 TTGCAAACCGCCACTTCGTCGGGAGAAGTATATTCTATAATTTCCGTGCAAAGATTGCTT 239 Query 53780 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 53839 |||| || || || |||| ||| ||||| ||||| || || || || ||||| Sbjct 240 GACTTTATCGTGCCCAAATGTTGCTGATTGCTCTTGCGATTGGCGGCGTCTTTGTAAAGC 299 Query 53840 ATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAAT 53877 || | ||||| || ||||| || || | ||| | ||| Sbjct 300 ATATACGGCGTTCCTGTTTCTATTTGCGCTTCCAAAAT 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581405387178960