Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq307809 143 3e-29 seq655988 93.3 5e-14 >seq307809 Length=2175 Score = 143 bits (158), Expect = 3e-29 Identities = 476/735 (65%), Gaps = 4/735 (1%) Strand=Plus/Plus Query 145535 ATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGT 145594 ||||||| ||||| |||| | || | | || || | ||| | ||| |||||| Sbjct 508 ATTAGACTGCCATTGCCATTTGTATCGGAGGATGTGGATTGTAATCAAACAGTTCAAAGT 567 Query 145595 CCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGG 145654 | || |||||||||| ||||| | || | |||||| | | | ||||| | Sbjct 568 CTTCATAGTTGAAGTCATCAATGTCTTTAACATTTCGTAGGATCTTCAAGCGAGGAAATG 627 Query 145655 GCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 145714 ||| || | | | ||||| ||||| || || | ||| || || || | ||| | Sbjct 628 GCCTTGGCTTGCGTTTTAGCTGCTCCTTCAACGGTTCAATGTGATTCAGATAAATGTGAG 687 Query 145715 CGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774 || |||| | ||||||||| || || || || || || | || || | ||| | Sbjct 688 TATCACCCATGTTGTGGATGAACTCTCCTGGTCTTAGTCCAGTCACATGAGCAATCATAT 747 Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834 | |||| || | ||||||||| ||||| || || || || || || | || |||||| Sbjct 748 ATGTCAACAAAGCGTAGCTGGCAATGTTAAATGGAACACCGAGACCAACATCTGCCGAGC 807 Query 145835 GCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAG-GTGG 145893 ||||||||| | |||| ||||| || ||| || || ||||||| |||| ||| |||| Sbjct 808 GCTGGTACAACAGGCACGAGAGTTCTCCGTTGGCAACATAGAACT-GCACCAGAGCGTGG 866 Query 145894 CAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTC 145953 || || ||||| ||||| ||| || || ||| ||||| || | | | | Sbjct 867 CATGGTGGCAGCGCCATTTTGGGAAGATCTTTCGGATTCCACGCACACATAATCATTCGT 926 Query 145954 CTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGC 146013 ||| | || || || |||| | | |||| || | ||||| ||||| |||||| Sbjct 927 CTGTCATTTGGTGAACTTTTAATCTTCTCAATCACATCTTTTAGCTGATCCACACCCTGC 986 Query 146014 CCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCC 146072 || ||||| | || | ||| ||| | || || | || | |||||| || || Sbjct 987 CCAGTATAATC-ATGATGCATGTCTTTGTAATCAGCGCCTGAATGACGCCACTGAAAACC 1045 Query 146073 GTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTC 146132 || || || || ||||| || ||| | | | || | ||||||| | Sbjct 1046 ATACACCGGTCCAAGGTCGCCTTCCTCACGATCGTTTAAACCAATTTTGTCGAGGAATGC 1105 Query 146133 CCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGT 146192 || || || |||||||||||||| | ||| || | | | ||| |||| | || Sbjct 1106 TCGTGAGCCATTGGCGTCCCAGATGTGGACATTTTTCTCAGCCAACTCCTTGGCATTTGT 1165 Query 146193 GGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGT 146252 || || | |||||||| | ||||||||| | || || |||||||||| | ||| || Sbjct 1166 TGATCCTCGAATGAACCACAACAGCTCTTCCACAACGCCTTTCCAGAAGACGCGCTTTGT 1225 Query 146253 GGTCAGCAGGGGGAA 146267 ||||| || || || Sbjct 1226 TGTCAGAAGAGGAAA 1240 >seq655988 Length=4118 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/238 (68%), Gaps = 27/238 (11%) Strand=Plus/Plus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 ||||| ||||| | ||||||||| | ||||||||| ||||||||||||| ||||| Sbjct 2615 TGGGCCACCATATGGGTCAGCAGCGCGTAGCTGGCGATGTTGAAGGGCAGGCCCAGGAAG 2674 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCA--GGAGAGCTCCCCGCCC------------- 145866 ||||| | ||||||||| |||||||| ||| | || ||||| Sbjct 2675 ATGTCGGCGCTGCGCTGGTAGAGCTGGCAACTGAGCGTGCCGCGCCCGCCCGGCGTCTGC 2734 Query 145867 ------GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920 |||||||||||||| | || | ||| |||||| ||| |||||| | || Sbjct 2735 GCCGGGGCCACGTAGAACTGAAAGAGTATGTGACAGGGCTGCAAGGCCATTTTGTCGAGT 2794 Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC---TCGGGGTTCCTCTTGA 145975 || ||| |||||||||| ||| || || | | || | |||||||| |||||| Sbjct 2795 TCGGCCACGTTCCAGGCGCTGACGATGA---TGCGGCGCGAGTCGGGGTTGGTCTTGA 2849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577836195229080