Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq649786 178 1e-39 >seq649786 Length=1608 Score = 178 bits (196), Expect = 1e-39 Identities = 330/486 (68%), Gaps = 18/486 (4%) Strand=Plus/Minus Query 116707 GAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTT 116766 || ||| ||| | |||| ||| || | ||||| ||||| |||| |||||| |||| || Sbjct 803 GAACGATTGGCAAGGCTTAAACCACGATGAGCGACATTTTATCACGCACGTTTTGGCGTT 744 Query 116767 TTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGT 116826 ||| |||||||||||||| || || ||||| ||||||| || | ||| | ||| || Sbjct 743 TTTTGCCGCCAGCGACGGAATTGTAAACGAAAATCTGGCGGAACATTTTGTGTCGGAAGT 684 Query 116827 GCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTC 116886 ||| | || || | ||||||||||| || || ||| | || || | ||||| Sbjct 683 GCAATATACGGAAGCTAAATTTTTCTACGGCTTCCAAATTGCCGTTGAAAATATCCACTC 624 Query 116887 GGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTT 116946 |||| |||||| ||||| || || |||||| || ||||||| |||| | Sbjct 623 CGAAACCTATTCGCTGCTCATTGATACCTACGTGAAAGACGCGCAGGAGAAAGACCGTCT 564 Query 116947 GTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTG 117006 | | ||||||| || |||||| ||||| ||| |||| ||||| |||||| | Sbjct 563 GCTTCACGCCATTGAAACGATGGAATGCGTGAAAAAGAAAGCCGATTGGGCGTT------ 510 Query 117007 GATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGG 117066 || ||||| ||| | || || || ||||| || || Sbjct 509 -------NNNNNNNNNNNNNNNNTC-AAGAGCGTCTGATTGCTTTTGCCGCCGTGGAAGG 458 Query 117067 CGTCTTCTTTTCGGG-CAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125 | ||||| ||||| |||| | | |||| |||||||| |||||||||||||| |||| Sbjct 457 GATTTTCTTCTCGGGTTCGTTTTG-CTCCATCTTTTGGCTGAAGAAACGCGGCCTGATGC 399 Query 117126 CCGGCCTGA-CTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTT 117184 | ||| ||| |||| | || || | ||||| | ||||| || |||||||||| ||| Sbjct 398 CGGGCTTGAGCTTTTCG-AATGAATTGATCTCGCGCGACGAAGGCTTGCATTGCGATTTT 340 Query 117185 GCCTGT 117190 |||||| Sbjct 339 GCCTGT 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504531447833520