Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq307809 215 3e-51 >seq307809 Length=2175 Score = 215 bits (238), Expect = 3e-51 Identities = 421/621 (68%), Gaps = 1/621 (0%) Strand=Plus/Plus Query 97010 GGAAA-GGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAA 97068 ||||| ||||| || | || | |||||||| | | | ||||||||||||| |||| Sbjct 621 GGAAATGGCCTTGGCTTGCGTTTTAGCTGCTCCTTCAACGGTTCAATGTGATTCAGATAA 680 Query 97069 ATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCG 97128 ||||||| ||| || | |||| || || ||||| || || |||| ||||| || Sbjct 681 ATGTGAGTATCACCCATGTTGTGGATGAACTCTCCTGGTCTTAGTCCAGTCACATGAGCA 740 Query 97129 ATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCA 97188 |||||| | || || | || ||||| ||||||||||| || || || || || | ||| Sbjct 741 ATCATATATGTCAACAAAGCGTAGCTGGCAATGTTAAATGGAACACCGAGACCAACATCT 800 Query 97189 GCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAAT 97248 || || | || || ||| | || || || | ||| | ||||| ||||| || Sbjct 801 GCCGAGCGCTGGTACAACAGGCACGAGAGTTCTCCGTTGGCAACATAGAACTGCACCAGA 860 Query 97249 ACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAAC 97308 | || || || |||| ||||||||| |||| |||| |||||| |||||||| | | Sbjct 861 GCGTGGCATGGTGGCAGCGCCATTTTGGGAAGATCTTTCGGATTCCACGCACACATAATC 920 Query 97309 ATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACG 97368 |||| ||| || |||| | | || | | ||| | | |||| ||||| || Sbjct 921 ATTCGTCTGTCATTTGGTGAACTTTTAATCTTCTCAATCACATCTTTTAGCTGATCCACA 980 Query 97369 CCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGG 97428 || | ||| ||||| || | | ||| || || || || |||| | ||| || Sbjct 981 CCCTGCCCAGTATAATCATGATGCATGTCTTTGTAATCAGCGCCTGAATGACGCCACTGA 1040 Query 97429 AATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAA 97488 || ||||| || ||||||||||| ||||| || | ||| ||||||| || || | Sbjct 1041 AAACCATACACCGGTCCAAGGTCGCCTTCCTCACGATCGTTTAAACCAATTTTGTCGAGG 1100 Query 97489 TAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCTG 97548 | | | || ||||| || ||||| ||||| ||| | || | ||| ||| Sbjct 1101 AATGCTCGTGAGCCATTGGCGTCCCAGATGTGGACATTTTTCTCAGCCAACTCCTTGGCA 1160 Query 97549 TCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTC 97608 | || ||||||| || |||||||||| ||||||||||| ||| |||| || || | | Sbjct 1161 TTTGTTGATCCTCGAATGAACCACAACAGCTCTTCCACAACGCCTTTCCAGAAGACGCGC 1220 Query 97609 TTAGTTGTTAAGAGAGGAAAA 97629 || ||||| | ||||||||| Sbjct 1221 TTTGTTGTCAGAAGAGGAAAA 1241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339770125301390