Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq307809 224 8e-54 >seq307809 Length=2175 Score = 224 bits (248), Expect = 8e-54 Identities = 554/827 (67%), Gaps = 19/827 (2%) Strand=Plus/Minus Query 19959 CAATGGTGTACAAAAAACAGATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCA 20018 ||| | | ||||||| | |||||| || |||||||| || || || || ||||| | | Sbjct 1324 CAAGGATTTACAAAAGA-AGATCGTACAGGAACTGGTACATTGTCAGTGTTTGG--TCAA 1268 Query 20019 ATCTCGATATA-ACT-TGAGAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGG 20076 || || | | | | |||| ||||| | | || || || || || || ||| Sbjct 1267 ATGATGAGGTTCAGTCTCCGAAACTCTTTTCCTCTTCTGACAACAAAGCGCGTCTTCTGG 1208 Query 20077 AAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTT 20136 ||||||||||| |||||| | || ||||| ||| ||||||||||||| | | ||| | Sbjct 1207 AAAGGCGTTGTGGAAGAGCTGTTGTGGTTCATTCGAGGATCAACAAATGCCAAGGAGTTG 1148 Query 20137 GTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTA-AGCAATTTTTACACAGCAA 20195 | || ||| || | || ||| ||| |||| || |||| || | ||| | Sbjct 1147 GCTGAGAAAAATGTCCACATCTGGGACGCCAATGGCTCACGAGCA-TTCCTCGACAAAAT 1089 Query 20196 TGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACA 20255 ||| || || | ||| | || || || | || || |||||||| ||||| ||| | || Sbjct 1088 TGGTTTAAACGATCGTGAGGAAGGCGACCTTGGACCGGTGTATGGTTTTCAGTGGCGTCA 1029 Query 20256 TTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATT 20315 || || ||||| || |||||| | ||||| ||| || || || ||||| | Sbjct 1028 TTCAGGCGCTGATTACAAAGACATGCATCATGATTATACTGGGCAGGGTGTGGATCAGCT 969 Query 20316 ACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGC 20375 | || |||| ||| | ||||||| ||||| |||||| |||| ||| | || || Sbjct 968 AAAAGATGTGATTGAGAAGATTAAAAGTTCACCAAATGACAGACGAATGATTATGTGTGC 909 Query 20376 CTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC--CAA 20433 ||||| | |||||| | || |||||| |||| ||||| || ||| || || Sbjct 908 GTGGAATCCGAAAGATCTTCCCAAAATGGCGCTGCCACCATGCCAC--GCTCTGGTGCAG 851 Query 20434 TTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGA 20493 || || ||||| || ||| | ||||| | |||| || || || || ||| | || Sbjct 850 TTCTATGTTGCCAACGGAGAACTCTCGTGCCTGTTGTACCAGCGCTCGGCAGATGTTGGT 791 Query 20494 CTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 || |||||||| || || ||||| || || || || | || ||||||||||| ||||| Sbjct 790 CTCGGTGTTCCATTTAACATTGCCAGCTACGCTTTGTTGACATATATGATTGCTCATGTG 731 Query 20554 ACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAAT 20613 || | ||| | | || || || |||||| ||| || || | || ||||| || ||| Sbjct 730 ACTGGACTAAGACCAGGAGAGTTCATCCACAACATGGGTGATACTCACATTTATCTGAAT 671 Query 20614 CATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGC 20673 || || ||||| || || ||| ||| ||| | |||| | ||| || | ||| Sbjct 670 CACATTGAACCGTTGAAGGAGCAGCTAAAACGCAAGCCAAGGCCATTTCC-TCGCTTGAA 612 Query 20674 ATTACT-CGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTG---TGTTAGA 20729 | || |||| ||||||||| ||| | || || || ||| || |||| |||| || Sbjct 611 GATCCTACGAAATGTTAAAGACATTGATGACTTCAACTATGAAGACTTTGAACTGTTTGA 552 Query 20730 AGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAAT 20776 ||| ||||| ||| | | || | ||||| |||| | || |||| Sbjct 551 ---TTACAATCCACATCCTCCGATACAAATGGCAATGGCAGTCTAAT 508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391110309871015