Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq649786 197 1e-45 seq644427 120 3e-22 seq1631541 107 2e-18 seq596412 100 2e-16 >seq649786 Length=1608 Score = 197 bits (218), Expect = 1e-45 Identities = 527/801 (66%), Gaps = 35/801 (4%) Strand=Plus/Minus Query 57501 ATGTCCGATGAACCACTTTTGCAAGAGAATCCCCGTAGA----TTTGTCATGTTTCCGAT 57556 |||| | | ||||| |||||||||| || | ||| |||||| | ||||| || Sbjct 943 ATGTTCCAGGAACCGATTTTGCAAGAAAA----CAAAGACCGCTTTGTCCTCTTTCCCAT 888 Query 57557 TGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGA 57616 || | | ||||||||||| | ||||| | || ||||| |||||||| | || Sbjct 887 TGCCCACCACGACATTTGGAAATTTTACAAGCAAGCCGAAGCCAGCTTTTGGACGGCTGA 828 Query 57617 AGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAA 57676 |||| | || | | | ||| ||| ||||||| | | | || | |||| || | Sbjct 827 AGAAATTGATTTAAGTCAAGATTTGAACGATTGGCAAGGCTTAAACCACGATGAGCGACA 768 Query 57677 TTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTT 57736 |||||| | ||||| ||||||||||| ||||| ||| || ||||| ||||| ||| | Sbjct 767 TTTTATCACGCACGTTTTGGCGTTTTTTGCCGCCAGCGACGGAATTGTAAACGAAAATCT 708 Query 57737 GGTCGAAAGATTTT-CACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795 || || || ||||| ||||||||| ||||| || | || || ||||| || | Sbjct 707 GG-CGGAACATTTTGTGTCGGAAGTGCAATATACGGAAGCTAAATTTTTCTACGGCTTCC 649 Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855 || | ||| ||||||| | || || |||| |||||||| ||||| ||||| ||||||| Sbjct 648 AAATTGCCGTTGAAAATATCCACTCCGAAACCTATTCGCTGCTCATTGATACCTACGTGA 589 Query 57856 AGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAAT-GCCCGCGATCGCC 57914 | ||| | |||||| | ||| | |||| || ||||| || | ||| | Sbjct 588 AAGACGCGCAGGAGAAAGACCGTCTGCTTCACGCCATTGAAACGATGGAATGCG-TGAAA 530 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 ||||| || || ||| | | | | ||| | Sbjct 529 AAGAAAGCCGATTGGGCGTTNNNNNNNNNNNNNNNNTCAA--------------GAGCGT 484 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGG-CAGCTTTGCGGCAATATT 58033 || || || || |||||||| ||||| || ||||| ||||| | ||||| | || || Sbjct 483 CTGATTGCTTTTGCCGCCGTGGAAGGGATTTTCTTCTCGGGTTCGTTTTGC-TCCATCTT 425 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 |||| |||||||||||||||||||||| ||| ||| ||| || || ||||| ||||| Sbjct 424 TTGGCTGAAGAAACGCGGCCTGATGCCGGGCTTGAGCTTTTCGAATGAATTGATCTCGCG 365 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCC--TAATGTACTCTCACATTGTCAATAAA 58151 |||||| || | ||| |||||||| || | | || |||| ||| || | | | Sbjct 364 CGACGAAGGCTTGCATTGCGATTTTGCCTGTCATTTATATACT-AAACA-CGTGATTCAG 307 Query 58152 CCGACGC---GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAG 58208 ||| || || || | | || ||||||| || || || | || ||||| ||| Sbjct 306 CCGTTGCCAAAAGAGCGGGTGATTGAAATTATCAAAGACGCCGTAGTAATTGAAAAGGAG 247 Query 58209 TTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAG 58268 ||||| ||||| | || || ||| | |||| ||||| | || ||||| | Sbjct 246 TTTGTGACCGATTCGCTTCCCGTGAGTTTAATCGGGATGAATGCCGCTTCGATGTGTCAA 187 Query 58269 TACATTGAGTTTGTTGCCGAC 58289 || || |||||||| || ||| Sbjct 186 TATATAGAGTTTGTGGCAGAC 166 >seq644427 Length=940 Score = 120 bits (132), Expect = 3e-22 Identities = 261/391 (67%), Gaps = 0/391 (0%) Strand=Plus/Plus Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 ||||||| || || || ||||| || || || || || ||||| || |||| || || | Sbjct 3 TCATAAATAGGTCGGGAATCCAAAGCGCATAAAAAAGATCGCGTGCCCGCATTTCTTCCT 62 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 ||||| || || || || |||||||| || || | || || ||||| || || || | Sbjct 63 TGCCGTGATTTTTCTTTAACTCCAAAAAATCAAAAATATCGGCGTGCCAGGGTTCTAGAT 122 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 ||| |||||| || | || |||||| || || || || || ||||| ||| Sbjct 123 AAATGGCAAAACTTCCTTTGCGTTTTCCGCCGCCTTGGTCTACATAGCGTGCCGTCATGT 182 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 | | ||||| || | || ||||| || | |||||| ||| | | Sbjct 183 CAAAATTGCGGAGCATGGGGATGATGCCGTTAGAGGTGCCGCCCGTTCCCTTTATGTAGG 242 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | ||||| || || |||||||||| | || || | ||| || |||||| || || Sbjct 243 AGCCTTTGGCGCGCACGTTGTGAATGCTCAAGCCGACGCCGCCCGCCGATTGGGAAATTT 302 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 | ||| |||||| | ||||| || ||||| ||||||||||| || || ||| || | Sbjct 303 TGGCGGTTTGTTTTAAGGTGTCATAAATGCCGTCGATGCTGTCGTCCTTCATCGTGAGGA 362 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGT 23742 ||| || || | ||||| |||||||| Sbjct 363 GGAAGCAGCTTGAAAGTTGCGGCTTGGGCGT 393 >seq1631541 Length=403 Score = 107 bits (118), Expect = 2e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 ||| || ||||| | ||||| || ||||| ||||| || || || |||| |||||| Sbjct 164 GGCAATGGAGGCCAAGTTGCAAACCGCCACTTCGTCGGGAGAAGTATATTCTATAATTTC 223 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139 || || |||||||| |||||||||||||||||| ||| ||||| || |||||| Sbjct 224 CGTGCAAAGATTGCTTGACTTTATCGTGCCCAAATGTTGCTGATTGCTCTTGCGATTGGC 283 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCG 23183 | || ||||| ||||| |||||||| || || || | |||| Sbjct 284 GGCGTCTTTGTAAAGCATATACGGCGTTCCTGTTTCTATTTGCG 327 >seq596412 Length=1263 Score = 100 bits (110), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || |||| || |||| ||||||| || |||| ||||| ||| | |||||||||||| Sbjct 730 TTATCCAGCGTGAACTTGATGGCGTCGGCCGCCGCTTTGGAGCGCAAATAATACATGCCT 671 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || |||| || |||||||||| |||||||| ||||| || | ||||||| |||| ||| Sbjct 670 GTTTTCAATCCTTTCTTCCACGCATAAAAATGCATCGAAGTAAGTTTTCCAAAACTTGGC 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 436519382793840